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Accession: PRJNA985394 ID: 985394

Bacterial community in the seawater and root sediment surrounding seagrass Zostera marina

Bacterial, eukaryotic and fungal communities in the seawater and root sediment surrounding seagrass Zostera marina Raw sequence reads

This project intends to investigate the impacts of mariculture to the bacterial, eukaryotic and fungal communities surrounding seagrass Zostera marina in the seawater and root sediment.
AccessionPRJNA985394
Data TypeGenome sequencing
ScopeEnvironment
Organismseawater metagenome[Taxonomy ID: 1561972]
unclassified sequences; metagenomes; ecological metagenomes; seawater metagenome
SubmissionRegistration date: 20-Jun-2023
Yantai University
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)109
SRA Experiments128
Other datasets
BioSample141
Assembly109
Assembly details:
Assembly levelNumber of Assemblies
Contig Contig
Total
109
109
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_039768875.1ContigJBDMZN000000000SAMN38508445
SCSW1.bin.9
Abyssibacter sp.
GCA_039767535.1ContigJBDNCB000000000SAMN38508511
SRSW4.bin.65
Akkermansiaceae bacterium
GCA_039767995.1ContigJBDNBD000000000SAMN38508487
SJSW4.bin.16
Akkermansiaceae bacterium
GCA_039768765.1ContigJBDMZV000000000SAMN38508453
SCSW2.bin.33
Akkermansiaceae bacterium
GCA_039768575.1ContigJBDNAC000000000SAMN38508460
SCSW3.bin.36
Akkermansiaceae bacterium
GCA_039768565.1ContigJBDNAG000000000SAMN38508464
SCSW4.bin.19
Akkermansiaceae bacterium
GCA_039768315.1ContigJBDNAR000000000SAMN38508475
SJSW1.bin.1
Akkermansiaceae bacterium
GCA_039768255.1ContigJBDNAW000000000SAMN38508480
SJSW2.bin.4
Akkermansiaceae bacterium
GCA_039768175.1ContigJBDNAZ000000000SAMN38508483
SJSW3.bin.44
Akkermansiaceae bacterium
GCA_039769135.1ContigJBDMZD000000000SAMN38508435
SCSW1.bin.16
Akkermansiaceae bacterium
GCA_039769075.1ContigJBDMZE000000000SAMN38508436
SCSW1.bin.22
Akkermansiaceae bacterium
GCA_039768895.1ContigJBDMZO000000000SAMN38508446
SCSW2.bin.10
Akkermansiaceae bacterium
GCA_039768095.1ContigJBDNBA000000000SAMN38508484
SJSW3.bin.48
Alphaproteobacteria bacterium
GCA_039767875.1ContigJBDNBO000000000SAMN38508498
SRSW2.bin.2
Alteriqipengyuania sp.
GCA_039770515.1ContigJBDMYD000000000SAMN38508409
NSW1.bin.43
Alteriqipengyuania sp.
GCA_039770335.1ContigJBDMYL000000000SAMN38508417
NSW2.bin.43
Alteriqipengyuania sp.
GCA_039767895.1ContigJBDNBJ000000000SAMN38508493
SRRS2.bin.4
Arenicellales bacterium
GCA_039768025.1ContigJBDNBG000000000SAMN38508490
SJSW4.bin.48
Bacteroidia bacterium
GCA_039768215.1ContigJBDNAX000000000SAMN38508481
SJSW2.bin.46
Bacteroidia bacterium
GCA_039768455.1ContigJBDNAJ000000000SAMN38508467
SCSW4.bin.39
Candidatus Arcticimaribacter sp.
GCA_039768735.1ContigJBDMZW000000000SAMN38508454
SCSW2.bin.42
Candidatus Arcticimaribacter sp.
GCA_039768675.1ContigJBDMZY000000000SAMN38508456
SCSW3.bin.14
Candidatus Arcticimaribacter sp.
GCA_039768985.1ContigJBDMZH000000000SAMN38508439
SCSW1.bin.3
Candidatus Arcticimaribacter sp.
GCA_039770595.1ContigJBDMXX000000000SAMN38508403
NSW1.bin.18
Candidatus Nanopelagicales bacterium
GCA_039770315.1ContigJBDMYN000000000SAMN38508419
NSW3.bin.15
Candidatus Nanopelagicales bacterium
GCA_039770455.1ContigJBDMYF000000000SAMN38508411
NSW2.bin.13
Celeribacter marinus
GCA_039769175.1ContigJBDMYZ000000000SAMN38508431
NSW4.bin.7
Celeribacter marinus
GCA_039770155.1ContigJBDMZA000000000SAMN38508432
NRS2.bin.1
Clostridiales bacterium
GCA_039768375.1ContigJBDNAO000000000SAMN38508472
SJRS4.bin.22
Desulfobacterales bacterium
GCA_039768445.1ContigJBDNAL000000000SAMN38508469
SJRS3.bin.13
Desulfobacterales bacterium
GCA_039767975.1ContigJBDNBI000000000SAMN38508492
SRRS2.bin.17
Desulfobacterales bacterium
GCA_039767955.1ContigJBDNBM000000000SAMN38508496
SRRS4.bin.17
Desulfobacterales bacterium
GCA_039768075.1ContigJBDNBH000000000SAMN38508491
SRRS1.bin.17
Desulfobacterales bacterium
GCA_039767915.1ContigJBDNBL000000000SAMN38508495
SRRS3.bin.4
Desulfuromonadales bacterium
GCA_039767815.1ContigJBDNBN000000000SAMN38508497
SRRS4.bin.4
Desulfuromonadales bacterium
GCA_039770435.1ContigJBDMYH000000000SAMN38508413
NSW2.bin.32
Flavobacteriaceae bacterium
GCA_039767715.1ContigJBDNBU000000000SAMN38508504
SRSW3.bin.13
Flavobacteriaceae bacterium
GCA_039768345.1ContigJBDNAQ000000000SAMN38508474
SJRS4.bin.9
Flavobacteriaceae bacterium
GCA_039768395.1ContigJBDNAN000000000SAMN38508471
SJRS3.bin.9
Flavobacteriaceae bacterium
GCA_039769215.1ContigJBDMYW000000000SAMN38508428
NSW4.bin.4
Flavobacteriaceae bacterium
GCA_039769225.1ContigJBDMYV000000000SAMN38508427
NSW4.bin.30
Flavobacteriales bacterium
GCA_039769115.1ContigJBDMZB000000000SAMN38508433
SCSW1.bin.11
Flavobacteriales bacterium
GCA_039770535.1ContigJBDMYC000000000SAMN38508408
NSW1.bin.42
Flavobacteriales bacterium
GCA_039770235.1ContigJBDMYQ000000000SAMN38508422
NSW3.bin.4
Flavobacteriales bacterium
GCA_039768295.1ContigJBDNAS000000000SAMN38508476
SJSW1.bin.21
Flavobacteriales bacterium
GCA_039768855.1ContigJBDMZP000000000SAMN38508447
SCSW2.bin.21
Flavobacteriales bacterium
GCA_039768545.1ContigJBDNAF000000000SAMN38508463
SCSW4.bin.16
Flavobacteriales bacterium
GCA_039768535.1ContigJBDNAE000000000SAMN38508462
SCSW3.bin.27
Flavobacteriales bacterium
GCA_039770415.1ContigJBDMYI000000000SAMN38508414
NSW2.bin.35
Flavobacteriales bacterium
GCA_039768665.1ContigJBDNAB000000000SAMN38508459
SCSW3.bin.3
Glaciecola sp.
GCA_039768815.1ContigJBDMZT000000000SAMN38508451
SCSW2.bin.3
Glaciecola sp.
GCA_039768655.1ContigJBDMZX000000000SAMN38508455
SCSW3.bin.12
Glaciecola sp.
GCA_039768415.1ContigJBDNAK000000000SAMN38508468
SCSW4.bin.4
Glaciecola sp.
GCA_039768975.1ContigJBDMZJ000000000SAMN38508441
SCSW1.bin.33
Glaciecola sp.
GCA_039770195.1ContigJBDMYS000000000SAMN38508424
NSW4.bin.16
Hellea sp.
GCA_039769005.1ContigJBDMZL000000000SAMN38508443
SCSW1.bin.43
Hyphomonas sp.
GCA_039767645.1ContigJBDNBW000000000SAMN38508506
SRSW3.bin.34
Ketobacter sp.
GCA_039769125.1ContigJBDMZC000000000SAMN38508434
SCSW1.bin.15
Lentimonas sp.
GCA_039768055.1ContigJBDNBF000000000SAMN38508489
SJSW4.bin.24
Lentimonas sp.
GCA_039768635.1ContigJBDNAA000000000SAMN38508458
SCSW3.bin.26
Lentimonas sp.
GCA_039768485.1ContigJBDNAH000000000SAMN38508465
SCSW4.bin.29
Lentimonas sp.
GCA_039768235.1ContigJBDNAU000000000SAMN38508478
SJSW1.bin.9
Lentimonas sp.
GCA_039768195.1ContigJBDNAV000000000SAMN38508479
SJSW2.bin.21
Lentimonas sp.
GCA_039768155.1ContigJBDNAY000000000SAMN38508482
SJSW3.bin.19
Lentimonas sp.
GCA_039768775.1ContigJBDMZS000000000SAMN38508450
SCSW2.bin.24
Lentimonas sp.
GCA_039767575.1ContigJBDNCA000000000SAMN38508510
SRSW4.bin.56
Marivita sp.
GCA_039767555.1ContigJBDNBZ000000000SAMN38508509
SRSW3.bin.65
Marivita sp.
GCA_039767775.1ContigJBDNBS000000000SAMN38508502
SRSW2.bin.5
Marivita sp.
GCA_039767835.1ContigJBDNBQ000000000SAMN38508500
SRSW2.bin.4
Nocardioides marinisabuli
GCA_039767735.1ContigJBDNBX000000000SAMN38508507
SRSW3.bin.5
Nocardioides sp.
GCA_039769235.1ContigJBDMYX000000000SAMN38508429
NSW4.bin.45
Nonlabens sp.
GCA_039770635.1ContigJBDMYA000000000SAMN38508406
NSW1.bin.30
Nonlabens sp.
GCA_039770275.1ContigJBDMYO000000000SAMN38508420
NSW3.bin.30
Nonlabens sp.
GCA_039768115.1ContigJBDNBC000000000SAMN38508486
SJSW3.bin.7
Oceanococcaceae bacterium
GCA_039769195.1ContigJBDMYY000000000SAMN38508430
NSW4.bin.6
Octadecabacter sp.
GCA_039770395.1ContigJBDMYJ000000000SAMN38508415
NSW2.bin.38
Octadecabacter sp.
GCA_039769035.1ContigJBDMZG000000000SAMN38508438
SCSW1.bin.29
Pacificibacter sp.
GCA_039768835.1ContigJBDMZR000000000SAMN38508449
SCSW2.bin.23
Pacificibacter sp.
GCA_039767595.1ContigJBDNBY000000000SAMN38508508
SRSW3.bin.52
Paracoccaceae bacterium
GCA_039767855.1ContigJBDNBP000000000SAMN38508499
SRSW2.bin.29
Phaeobacter gallaeciensis
GCA_039770175.1ContigJBDMYT000000000SAMN38508425
NSW4.bin.26
Planktotalea arctica
GCA_039770495.1ContigJBDMYE000000000SAMN38508410
NSW1.bin.8
Planktotalea arctica
GCA_039770475.1ContigJBDMYG000000000SAMN38508412
NSW2.bin.24
Planktotalea arctica
GCA_039770295.1ContigJBDMYP000000000SAMN38508421
NSW3.bin.38
Planktotalea arctica
GCA_039770255.1ContigJBDMYR000000000SAMN38508423
NSW4.bin.12
Polaribacter sp.
GCA_039770375.1ContigJBDMYK000000000SAMN38508416
NSW2.bin.42
Polaribacter sp.
GCA_039768955.1ContigJBDMZK000000000SAMN38508442
SCSW1.bin.37
Polaribacter sp.
GCA_039768935.1ContigJBDMZM000000000SAMN38508444
SCSW1.bin.51
Polaribacter sp.
GCA_039769065.1ContigJBDMZF000000000SAMN38508437
SCSW1.bin.28
Polaribacter sp.
GCA_039768135.1ContigJBDNBB000000000SAMN38508485
SJSW3.bin.69
Polaribacter sp.
GCA_039768015.1ContigJBDNBE000000000SAMN38508488
SJSW4.bin.21
Polaribacter sp.
GCA_039768755.1ContigJBDMZU000000000SAMN38508452
SCSW2.bin.30
Polaribacter sp.
GCA_039768555.1ContigJBDNAD000000000SAMN38508461
SCSW3.bin.49
Polaribacter sp.
GCA_039768275.1ContigJBDNAT000000000SAMN38508477
SJSW1.bin.39
Polaribacter sp.
GCA_039767695.1ContigJBDNBV000000000SAMN38508505
SRSW3.bin.22
Polycyclovorans sp.
GCA_039769045.1ContigJBDMZI000000000SAMN38508440
SCSW1.bin.31
Qipengyuania flava
GCA_039767755.1ContigJBDNBT000000000SAMN38508503
SRSW2.bin.9
Sulfurovum sp.
GCA_039767935.1ContigJBDNBK000000000SAMN38508494
SRRS2.bin.6
Sulfurovum sp.
GCA_039768435.1ContigJBDNAM000000000SAMN38508470
SJRS3.bin.5
Thiogranum sp.
GCA_039768325.1ContigJBDNAP000000000SAMN38508473
SJRS4.bin.3
Thiogranum sp.
GCA_039767795.1ContigJBDNBR000000000SAMN38508501
SRSW2.bin.40
Verrucomicrobiales bacterium
GCA_039770555.1ContigJBDMYB000000000SAMN38508407
NSW1.bin.36
Verrucomicrobiales bacterium
GCA_039770575.1ContigJBDMXZ000000000SAMN38508405
NSW1.bin.29
Wenyingzhuangia sp.
GCA_039768515.1ContigJBDNAI000000000SAMN38508466
SCSW4.bin.33
Wenyingzhuangia sp.
GCA_039768645.1ContigJBDMZZ000000000SAMN38508457
SCSW3.bin.23
Wenyingzhuangia sp.
GCA_039768865.1ContigJBDMZQ000000000SAMN38508448
SCSW2.bin.22
Wenyingzhuangia sp.
GCA_039770215.1ContigJBDMYU000000000SAMN38508426
NSW4.bin.29
Winogradskyella sp.
GCA_039770615.1ContigJBDMXY000000000SAMN38508404
NSW1.bin.25
Yoonia sp.
GCA_039770355.1ContigJBDMYM000000000SAMN38508418
NSW3.bin.1
Yoonia sp.
SRA Data Details
ParameterValue
Data volume, Gbases449
Data volume, Tbytes0.15

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