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Accession: PRJNA348753 ID: 348753

metagenomes

Recovery of nearly 8,000 uncultivated bacterial and archaeal genomes substantially flesh out the tree of life

Challenges in cultivating microorganisms have limited the phylogenetic diversity of currently available microbial genomes. More...
AccessionPRJNA348753
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismmetagenomes[Taxonomy ID: 408169]
unclassified sequences; metagenomes
PublicationsParks DH et al., "Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life.", Nat Microbiol, 2017 Nov;2(11):1533-1542
SubmissionRegistration date: 12-Sep-2017
University of Queensland
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)7903
SRA Experiments7889
Publications
PubMed1
Other datasets
BioSample7903
Assembly7903
Assembly details:
Assembly levelNumber of Assemblies
7854
48
7902
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_002409655.1ScaffoldDHOA00000000SAMN06452529
UBA5402
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UBA5806
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UBA6159
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UBA5558
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UBA6819
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UBA3949
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UBA2187
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UBA3560
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UBA3563
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UBA3564
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UBA3565
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UBA3574
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UBA4530
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UBA2999
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UBA6911
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UBA7540
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UBA823
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UBA890
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UBA1307
GCA_002314435.1ScaffoldDCFV00000000SAMN06453558
UBA1795
GCA_002433055.1ScaffoldDJHJ00000000SAMN06452349
UBA6623
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UBA3485
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UBA2057
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UBA2489
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UBA3169
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UBA2556
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UBA1894
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UBA899
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UBA3983
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UBA4117
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UBA3966
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UBA4562
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UBA5647
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UBA5671
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UBA5921
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UBA6700
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GCA_002421185.1ScaffoldDIJK00000000SAMN06453337
UBA5646
GCA_002417725.1ScaffoldDICS00000000SAMN06453967
UBA5820
GCA_002430235.1ScaffoldDJBW00000000SAMN06455492
UBA5966
GCA_002429375.1ScaffoldDIZP00000000SAMN06451128
UBA6025
GCA_002428405.1ScaffoldDIWD00000000SAMN06454759
UBA6115
GCA_002422375.1ScaffoldDIUQ00000000SAMN06453529
UBA6154
GCA_002451485.1ScaffoldDKCL00000000SAMN06454476
UBA6875
GCA_002297405.1ScaffoldDBLE00000000SAMN06453412
UBA732
GCA_002470685.1ScaffoldDKNK00000000SAMN06452339
UBA7390
GCA_002469725.1ScaffoldDKNH00000000SAMN06452342
UBA7393
GCA_002479815.1ScaffoldDLPA00000000SAMN06454498
UBA7470
GCA_002481525.1ScaffoldDLEH00000000SAMN06453513
UBA7751
GCA_002481425.1ScaffoldDLEA00000000SAMN06453520
UBA7758
GCA_002481375.1ScaffoldDLDY00000000SAMN06453015
UBA7760
GCA_002293205.1ScaffoldDBCT00000000SAMN06451664
UBA951
GCA_002311335.1ScaffoldDBZX00000000SAMN06452098
UBA1149
GCA_002311805.1ScaffoldDBZM00000000SAMN06454633
UBA1160
GCA_002382735.1ScaffoldDFZN00000000SAMN06454802
UBA4055
GCA_002413145.1ScaffoldDHWK00000000SAMN06453580
UBA5184
GCA_002410925.1ScaffoldDHPR00000000SAMN06451889
UBA5359
GCA_002428525.1ScaffoldDIWU00000000SAMN06453689
UBA6098
GCA_002435745.1ScaffoldDIWT00000000SAMN06453690
UBA6099
GCA_002423385.1ScaffoldDIVV00000000SAMN06453262
UBA6123
GCA_002422125.1ScaffoldDITF00000000SAMN06457399
UBA6191
GCA_002478245.1ScaffoldDLMW00000000SAMN06455583
UBA7526
GCA_002327475.1ScaffoldDCWC00000000SAMN06455571
UBA2172
GCA_002403295.1ScaffoldDHHN00000000SAMN06450739
UBA4771
GCA_002403075.1ScaffoldDHHB00000000SAMN06455476
UBA4783
GCA_002348145.1ScaffoldDDYU00000000SAMN06452997
UBA2226
GCA_002347565.1ScaffoldDDXR00000000SAMN06453501
UBA2255
GCA_002345865.1ScaffoldDDWH00000000SAMN06457355
UBA2291
GCA_002403115.1ScaffoldDHHE00000000SAMN06455477
UBA4780
GCA_002412795.1ScaffoldDHVS00000000SAMN06450513
UBA5202
GCA_002424885.1ScaffoldDILF00000000SAMN06455921
UBA5599
GCA_002308555.1ScaffoldDBWD00000000SAMN06455243
UBA1247
GCA_002329605.1ScaffoldDCTN00000000SAMN06451854
UBA1439
GCA_002366995.1ScaffoldDFCM00000000SAMN06454897
UBA3054
GCA_002440765.1ScaffoldDJVC00000000SAMN06455703
UBA6266
GCA_002382585.1ScaffoldDFYC00000000SAMN06456324
UBA4092
GCA_002428325.1ScaffoldDIVR00000000SAMN06453266
UBA6127
GCA_002323085.1ScaffoldDCPF00000000SAMN06451143
UBA1551
GCA_002322535.1ScaffoldDCOX00000000SAMN06451151
UBA1559
GCA_002310995.1ScaffoldDBYV00000000SAMN06457420
UBA1177
GCA_002310035.1ScaffoldDBYC00000000SAMN06456569
UBA1196
GCA_002309575.1ScaffoldDBXP00000000SAMN06454758
UBA1209
GCA_002366955.1ScaffoldDFCK00000000SAMN06454895
UBA3056
GCA_002456105.1ScaffoldDKMC00000000SAMN06452356
UBA6624
GCA_002501535.1ScaffoldDLTY00000000SAMN06453281
UBA7824
GCA_002433595.1ScaffoldDJIL00000000SAMN06451400
UBA6595
GCA_002471405.1ScaffoldDKPW00000000SAMN06455356
UBA7324
GCA_002480255.1ScaffoldDLBU00000000SAMN06452077
UBA7816
GCA_002296285.1ScaffoldDBHX00000000SAMN06456108
UBA817
GCA_002295665.1ScaffoldDBHN00000000SAMN06450817
UBA827
GCA_002313735.1ScaffoldDCCI00000000SAMN06452230
UBA1085
GCA_002329445.1ScaffoldDCTU00000000SAMN06453843
UBA1432
GCA_002406095.1ScaffoldDHNB00000000SAMN06455120
UBA4627
GCA_002407045.1ScaffoldDHKB00000000SAMN06456592
UBA4705
GCA_002425855.1ScaffoldDINA00000000SAMN06455391
UBA5552
GCA_002423485.1ScaffoldDIWH00000000SAMN06454064
UBA6111
GCA_002440205.1ScaffoldDJRY00000000SAMN06453390
UBA6348
GCA_002439625.1ScaffoldDJOM00000000SAMN06453291
UBA6438
GCA_002363235.1ScaffoldDEUV00000000SAMN06456471
UBA3253
GCA_002414865.1ScaffoldDIAQ00000000SAMN06454970
UBA5074
GCA_002430795.1ScaffoldDJCY00000000SAMN06451254
UBA5938
GCA_002436025.1ScaffoldDIXM00000000SAMN06452882
UBA6080
GCA_002479745.1ScaffoldDLOW00000000SAMN06454494
UBA7474
GCA_002316275.1ScaffoldDCDE00000000SAMN06455730
UBA1063
GCA_002327905.1ScaffoldDCUY00000000SAMN06451428
UBA2202
GCA_002347155.1ScaffoldDDXO00000000SAMN06453496
UBA2258
GCA_002367385.1ScaffoldDFBU00000000SAMN06455135
UBA3072
GCA_002366725.1ScaffoldDFBT00000000SAMN06455134
UBA3073
GCA_002366635.1ScaffoldDFBN00000000SAMN06455126
UBA3079
GCA_002403255.1ScaffoldDHHL00000000SAMN06450737
UBA4773
GCA_002424565.1ScaffoldDIKM00000000SAMN06452065
UBA5618
GCA_002421425.1ScaffoldDIJZ00000000SAMN06455823
UBA5631
GCA_002441125.1ScaffoldDJVI00000000SAMN06455701
UBA6260
GCA_002305475.1ScaffoldDBRB00000000SAMN06452611
UBA1379
GCA_002305205.1ScaffoldDBQJ00000000SAMN06452364
UBA1397
GCA_002305115.1ScaffoldDBQF00000000SAMN06457165
UBA1401
SRA Data Details
ParameterValue
Data volume, Gbases1,220
Data volume, Tbytes0.61

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