Saccharomyces (ID 522928) - BioProject

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Accession: PRJNA522928 ID: 522928

Saccharomyces

Fermentation associated Saccharomyces hybrids and pure parent strains raw sequence reads

Whole-genome sequencing of Saccharomyces yeasts hybrids isolated from wild and fermentation environments and select pure strains of the parent species. Fermentation innovation through complex hybridization of wild and domesticated yeasts.

Accession	PRJNA522928
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Saccharomyces[Taxonomy ID: 4930] Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Publications	Langdon QK et al., "Fermentation innovation through complex hybridization of wild and domesticated yeasts.", Nat Ecol Evol, 2019 Nov;3(11):1576-1586
Submission	Registration date: 18-Nov-2019 University of Wisconsin-Madison
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	121
SRA Experiments	481
Publications
PubMed	1
PMC	1
Other datasets
BioSample	213
Assembly	121

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

120
1
121

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_013180695.1	DUXZ00000000	SAMN00253964	CBS 380	Saccharomyces bayanus
GCA_013180675.1	DUXY00000000	SAMD00035495	CBS 380	Saccharomyces bayanus
GCA_013180165.1	DUXN00000000	SAMN00253963	FM1309	Saccharomyces bayanus
GCA_013180125.1	DUXM00000000	SAMD00035494	NBRC1948	Saccharomyces bayanus NBRC1948
GCA_013180065.1	DUXK00000000	SAMN02483516	NCAIM 676	Saccharomyces bayanus
GCA_013180045.1	DUXI00000000	SAMN04286287	AWRI2880	Saccharomyces cerevisiae
GCA_013181305.1	DUXR00000000	SAMN04286306	AWRI2911	Saccharomyces cerevisiae
GCA_013181185.1	DUWX00000000	SAMN04286324	WLP500	Saccharomyces cerevisiae
GCA_013181245.1	DUXB00000000	SAMN04286162	AWRI1432	Saccharomyces cerevisiae
GCA_013181225.1	DUXA00000000	SAMN04286157	AWRI1427	Saccharomyces cerevisiae
GCA_013183865.1	DUYQ00000000	SAMN04286131	AWRI767	Saccharomyces cerevisiae
GCA_013183875.1	DUYP00000000	SAMN04286135	AWRI795	Saccharomyces cerevisiae
GCA_013183845.1	DUYO00000000	SAMN04286146	AWRI935	Saccharomyces cerevisiae
GCA_013183905.1	DUYR00000000	SAMN04286160	AWRI1430	Saccharomyces cerevisiae
GCA_009667455.1	VZZD00000000	SAMN10973810	yHQL694	Saccharomyces cerevisiae
GCA_009666185.1	VZVY00000000	SAMN10973798	yHQL616	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009666355.1	VZWI00000000	SAMN10973788	yHCT132	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009666255.1	VZWA00000000	SAMN10973778	yHAB32	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009666195.1	VZVZ00000000	SAMN10973787	yHCT131	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009666115.1	VZVV00000000	SAMN10973783	yHAB53	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009666145.1	VZVX00000000	SAMN10973782	yHAB50	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009666095.1	VZVT00000000	SAMN10973799	yHQL617	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009665995.1	VZVQ00000000	SAMN10973802	yHQL620	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009666085.1	VZVU00000000	SAMN10973780	yHAB37	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009666025.1	VZVS00000000	SAMN10973800	yHQL618	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009665705.1	VZVF00000000	SAMN10973807	yHQL628	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009666725.1	VZWE00000000	SAMN10973779	yHAB36	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009666575.1	VZWY00000000	SAMN10973797	yHQL582	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009666665.1	VZWD00000000	SAMN10973784	yHAB585	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009666655.1	VZVW00000000	SAMN10973781	yHAB38	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009666015.1	VZVO00000000	SAMN10973785	yHAB589	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009665875.1	VZVK00000000	SAMN10973804	yHQL625	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009665865.1	VZVJ00000000	SAMN10973805	yHQL626	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009665905.1	VZVM00000000	SAMN10973803	yHQL624	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009665895.1	VZVL00000000	SAMN10973790	yHCT134	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009665755.1	VZVH00000000	SAMN10973791	yHCT135	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009665685.1	VZVE00000000	SAMN10973808	yHQL629	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009665795.1	VZVI00000000	SAMN10973806	yHQL627	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009665725.1	VZVG00000000	SAMN10973777	yHAB28	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009665625.1	VZVC00000000	SAMN10973775	yHAB213	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009665675.1	VZVD00000000	SAMN10973776	yHAB25	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009665575.1	VZUY00000000	SAMN10973796	yHDD49	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009665565.1	VZUZ00000000	SAMN10973792	yHCT145	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009665555.1	VZVB00000000	SAMN10973809	yHQL630	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009667515.1	VZYK00000000	SAMN10973795	yHCT83	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009667335.1	VZYP00000000	SAMN10973794	yHCT80	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009667345.1	VZYT00000000	SAMN10973793	yHCT79	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009667215.1	VZXY00000000	SAMN10973786	yHCT111	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009667295.1	VZYC00000000	SAMN10973789	yHCT133	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009666635.1	VZVR00000000	SAMN10973801	yHQL619	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009667225.1	VZXV00000000	SAMN10973773	FM1203	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009667125.1	VZXJ00000000	SAMN10973774	FM471	Saccharomyces cerevisiae x Saccharomyces eubayanus
GCA_009667055.1	VZXH00000000	SAMN10973901	yHQL563	Saccharomyces cerevisiae x Saccharomyces eubayanus x Saccharomyces kudriavzevii x Saccharomyces uvarum
GCA_009666875.1	VZXC00000000	SAMN10973902	yHQL568	Saccharomyces cerevisiae x Saccharomyces eubayanus x Saccharomyces kudriavzevii x Saccharomyces uvarum
GCA_009666495.1	VZWW00000000	SAMN10973900	yHQL557	Saccharomyces cerevisiae x Saccharomyces eubayanus x Saccharomyces kudriavzevii x Saccharomyces uvarum
GCA_009666275.1	VZWC00000000	SAMN10973903	yHAB34	Saccharomyces cerevisiae x Saccharomyces eubayanus x Saccharomyces uvarum
GCA_009666835.1	VZZC00000000	SAMN10973904	yHQL574	Saccharomyces cerevisiae x Saccharomyces eubayanus x Saccharomyces uvarum
GCA_009665985.1	VZVN00000000	SAMN10973898	yHQL621	Saccharomyces cerevisiae x Saccharomyces kudriavzevii
GCA_009665545.1	VZUX00000000	SAMN10973894	FM64	Saccharomyces cerevisiae x Saccharomyces kudriavzevii
GCA_009665535.1	VZVA00000000	SAMN10973896	yHCT142	Saccharomyces cerevisiae x Saccharomyces kudriavzevii
GCA_009666265.1	VZWB00000000	SAMN10973895	yHAB44	Saccharomyces cerevisiae x Saccharomyces kudriavzevii
GCA_009667415.1	WART00000000	SAMN12618058	W27	Saccharomyces cerevisiae x Saccharomyces kudriavzevii
GCA_009667545.1	VZXT00000000	SAMN10973897	yHQL783	Saccharomyces cerevisiae x Saccharomyces kudriavzevii
GCA_009666465.1	VZWS00000000	SAMN10973899	yHQL560	Saccharomyces cerevisiae x Saccharomyces kudriavzevii x Saccharomyces eubayanus
GCA_013180665.1	DUXW00000000	SAMN02427243	CID 1	Saccharomyces cerevisiae x Saccharomyces kudriavzevii x Saccharomyces uvarum
GCA_013180725.1	DUYB00000000	SAMN02427242	CBS 2834	Saccharomyces cerevisiae x Saccharomyces kudriavzevii x Saccharomyces uvarum
GCA_013180185.1	DUXO00000000	SAMN09453052	Muri	Saccharomyces cerevisiae x Saccharomyces uvarum
GCA_013181345.1	DUYH00000000	SAMN03859906	CBS 1503	Saccharomyces eubayanus
GCA_009666585.1	VZXA00000000	SAMN10973932	yHQL581	Saccharomyces eubayanus x Saccharomyces uvarum
GCA_009666475.1	VZWU00000000	SAMN10973921	yHQL559	Saccharomyces eubayanus x Saccharomyces uvarum
GCA_009666405.1	VZWQ00000000	SAMN10973917	yHQL554	Saccharomyces eubayanus x Saccharomyces uvarum
GCA_009666445.1	VZWR00000000	SAMN10973922	yHQL561	Saccharomyces eubayanus x Saccharomyces uvarum
GCA_009667045.1	VZXG00000000	SAMN10973923	yHQL564	Saccharomyces eubayanus x Saccharomyces uvarum
GCA_009666955.1	VZXE00000000	SAMN10973925	yHQL566	Saccharomyces eubayanus x Saccharomyces uvarum
GCA_009666965.1	VZXF00000000	SAMN10973924	yHQL565	Saccharomyces eubayanus x Saccharomyces uvarum
GCA_009666865.1	VZXB00000000	SAMN10973927	yHQL569	Saccharomyces eubayanus x Saccharomyces uvarum
GCA_009666845.1	VZWZ00000000	SAMN10973930	yHQL573	Saccharomyces eubayanus x Saccharomyces uvarum
GCA_009666535.1	VZWX00000000	SAMN10973919	yHQL556	Saccharomyces eubayanus x Saccharomyces uvarum
GCA_009666755.1	VZWT00000000	SAMN10973928	yHQL570	Saccharomyces eubayanus x Saccharomyces uvarum
GCA_009666385.1	VZWP00000000	SAMN10973918	yHQL555	Saccharomyces eubayanus x Saccharomyces uvarum
GCA_009666335.1	VZWH00000000	SAMN10973916	yHQL522	Saccharomyces eubayanus x Saccharomyces uvarum
GCA_009667385.1	WARU00000000	SAMN12618059	yHQL562	Saccharomyces eubayanus x Saccharomyces uvarum
GCA_009666905.1	VZXD00000000	SAMN10973926	yHQL567	Saccharomyces eubayanus x Saccharomyces uvarum
GCA_009667145.1	VZXK00000000	SAMN10973929	yHQL572	Saccharomyces eubayanus x Saccharomyces uvarum
GCA_009667075.1	VZXI00000000	SAMN10973931	yHQL580	Saccharomyces eubayanus x Saccharomyces uvarum
GCA_009667195.1	VZXL00000000	SAMN10973914	FM473	Saccharomyces eubayanus x Saccharomyces uvarum
GCA_009667275.1	VZXZ00000000	SAMN10973915	yHCT110	Saccharomyces eubayanus x Saccharomyces uvarum
GCA_009666765.1	VZWV00000000	SAMN10973920	yHQL558	Saccharomyces eubayanus x Saccharomyces uvarum
GCA_013180745.1	DUYC00000000	SAMD00035488	CBS 2440	Saccharomyces pastorianus
GCA_013180785.1	DUYF00000000	SAMN03177476	CBS 1513	Saccharomyces pastorianus
GCA_013179865.1	DUWZ00000000	SAMD00035489	Weihenstephan 34/70	Saccharomyces pastorianus Weihenstephan 34/70
GCA_013179845.1	DUWY00000000	SAMN03859903	W34/70	Saccharomyces pastorianus
GCA_013179775.1	DUWW00000000	SAMN03174146	CBS 1483	Saccharomyces pastorianus
GCA_013181485.1	DUYK00000000	SAMN03174145	CBS 1483	Saccharomyces pastorianus
GCA_013181535.1	DUYM00000000	SAMD00035487	CBS 1174	Saccharomyces pastorianus
GCA_013181515.1	DUYL00000000	SAMD00035490	CBS 1483	Saccharomyces pastorianus
GCA_013180355.1	DUXX00000000	SAMD00035492	CBS 5832	Saccharomyces pastorianus
GCA_013180795.1	DUYG00000000	SAMD00035485	CBS 1513	Saccharomyces pastorianus CBS 1513
GCA_013180735.1	DUYD00000000	SAMD00035491	CBS 2156	Saccharomyces pastorianus
GCA_013181375.1	DUYJ00000000	SAMD00035496	CBS 1484	Saccharomyces pastorianus
GCA_013181335.1	DUYE00000000	SAMD00035486	CBS 1538	Saccharomyces pastorianus
GCA_013180645.1	DUXU00000000	SAMEA2239847	-	Saccharomyces pastorianus
GCA_013183815.1	DUYI00000000	SAMD00035484	CBS 1503	Saccharomyces pastorianus CBS 1503
GCA_013265755.1	DUXV00000000	SAMEA2239845	-	Saccharomyces pastorianus
GCA_013265705.1	DUXJ00000000	SAMN02427230	NCAIM 00868	Saccharomyces uvarum
GCA_013265775.1	DUYA00000000	SAMN02427234	CBS 377	Saccharomyces uvarum
GCA_013265745.1	DUYS00000000	SAMN02427240	148.01	Saccharomyces uvarum
GCA_013179785.1	DUWV00000000	SAMN02427217	ZP 646	Saccharomyces uvarum
GCA_013183795.1	DUXC00000000	SAMN02483515	S6U	Saccharomyces uvarum
GCA_013181555.1	DUYN00000000	SAMEA2292747	-	Saccharomyces uvarum
GCA_013179815.1	DUWU00000000	SAMN02427220	ZP 853	Saccharomyces uvarum
GCA_013180345.1	DUXT00000000	SAMN02427232	DBVPG 7786	Saccharomyces uvarum
GCA_013180235.1	DUXQ00000000	SAMN02427241	GM 14	Saccharomyces uvarum
GCA_013179935.1	DUXE00000000	SAMEA2292749	-	Saccharomyces uvarum
GCA_013180255.1	DUXS00000000	SAMN02427233	DBVPG 7787	Saccharomyces uvarum
GCA_013180195.1	DUXP00000000	SAMN02427237	M 488	Saccharomyces uvarum
GCA_013179855.1	DUXD00000000	SAMEA2292750	-	Saccharomyces uvarum
GCA_013180005.1	DUXH00000000	SAMEA2292748	-	Saccharomyces uvarum
GCA_013179955.1	DUXF00000000	SAMN02427238	PJS 9	Saccharomyces uvarum
GCA_013179965.1	DUXG00000000	SAMN02427239	PJS 2-95	Saccharomyces uvarum
GCA_013180055.1	DUXL00000000	SAMN02427231	NCAIM 01116	Saccharomyces uvarum

SRA Data Details

Parameter	Value
Data volume, Gbases	202
Data volume, Tbytes	0.12

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Saccharomyces

Fermentation associated Saccharomyces hybrids and pure parent strains raw sequence reads

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