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Accession: PRJNA790449 ID: 790449

Phylogenomics reveals the evolution of lichen-forming abilities in chlorophyte algae

We sequenced and compared genomes of green algal lichen symbionts and free-living green algae. More...

Accession	PRJNA790449
Data Type	Genome sequencing
Scope	Multispecies
Publications	Puginier C et al., "Phylogenomics reveals the evolutionary origins of lichenization in chlorophyte algae.", Nat Commun, 2024 May 24;15(1):4452
Grants	"TULIP-GS" (Grant ID ANR-18-EURE-0019, École Universitaire de Recherche (EUR), France) "Engineering Nitrogen Symbiosis for Africa (ENSA)" (Grant ID OPP1172165, University of Cambridge by the Bill & Melinda Gates Foundation and the UK Foreign, Commonwealth and Development Office) "TULIP" (Grant ID ANR-10-LABX-41, Laboratoires d’Excellence (LABEX), France) "LOEWE-Centre for Translational Biodiversity Genomics (TBG)" (Grant ID LOEWE-TBG: LOEWE/1/10/519/03/03.001(0014)/52, Hessen State Ministry of Higher Education, Research and the Arts (HMWK), Germany)
Submission	Registration date: 18-Dec-2021 Senckenberg

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	3289
WGS master	9
SRA Experiments	23
Protein Sequences	110151
Publications
PubMed	1
PMC	1
Other datasets
BioSample	14
Assembly	9

Assembly details:

Assembly level

Number of Assemblies

Scaffold

Contig

8
1
9

Assembly	Level	WGS	BioSample	Strain	Taxonomy
GCA_040144375.1		JALJOV000000000	SAMN24199001	SAG 2523	Apatococcus fuscideae
GCA_040144355.1		JALJOS000000000	SAMN24199002	SAG 2145	Apatococcus lobatus
GCA_040182555.1		JALJOT000000000	SAMN24199003	SAG 216-7	Coccomyxa subellipsoidea
GCA_040144335.1		JALJOU000000000	SAMN24199006	SAG 245.80	Elliptochloris bilobata
GCA_040144405.1		JALJOQ000000000	SAMN24199009	SAG 2036	Symbiochloris irregularis
GCA_040206735.1		JALJON000000000	SAMN24199000	C0004	Trebouxia sp. C0004
GCA_040206755.1		JALJOO000000000	SAMN24198999	C0005	Trebouxia sp. C0005
GCA_040206745.1		JALJOP000000000	SAMN24198998	C0006	Trebouxia sp. C0006
GCA_040144395.1		JALJOR000000000	SAMN24199008	SAG 2043	[Myrmecia] bisecta

SRA Data Details

Parameter	Value
Data volume, Gbases	190
Data volume, Mbytes	53314

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