Streptococcus pneumoniae (ID 1088126) - BioProject

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Accession: PRJNA1088126 ID: 1088126

Streptococcus pneumoniae

WGS of Streptococcus pneumoniae Multiplexed Opsonophagocytic Assay (MOPA) strains

See Genome Information for Streptococcus pneumoniae

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729 additional projects are related by organism.

Whole Genome Sequencing of well-characterized pneumococcal strains used in the Multiplex Opsonophagocytic Assay (MOPA) to measure pneumococcal antibody function via killing of pneumococci by serum antibodies in vitro. MOPA strains are used to study the impact of pneumococcal vaccines.

Accession	PRJNA1088126
Data Type	Genome sequencing
Scope	Multiisolate
Organism	Streptococcus pneumoniae[Taxonomy ID: 1313] Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae
Submission	Registration date: 14-Mar-2024 University of Alabama at Birmingham
Related Resources	Bacterial Respiratory Pathogen Reference Laboratory at the University of Alabama at Birmingham
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	12
SRA Experiments	12
Other datasets
BioSample	12
Assembly	12

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

12
12

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_038448795.1	JBCEXA000000000	SAMN40301227	STREP6A	Streptococcus pneumoniae
GCA_038448775.1	JBCEWW000000000	SAMN40378208	TREP12F	Streptococcus pneumoniae
GCA_038448755.1	JBCEWX000000000	SAMN40384300	TREP7C	Streptococcus pneumoniae
GCA_038449095.1	JBCEWY000000000	SAMN40378207	STREP16F	Streptococcus pneumoniae
GCA_038449075.1	JBCEWV000000000	SAMN40378209	TREP15C	Streptococcus pneumoniae
GCA_038448875.1	JBCEXE000000000	SAMN40301305	OREP15A	Streptococcus pneumoniae
GCA_038448835.1	JBCEXD000000000	SAMN40301306	OREP31	Streptococcus pneumoniae
GCA_038448855.1	JBCEXB000000000	SAMN40377929	SPEC24F	Streptococcus pneumoniae
GCA_038448815.1	JBCEXC000000000	SAMN40301307	OREP35B	Streptococcus pneumoniae
GCA_038447815.1	JBCEWU000000000	SAMN40383727	TREP23A	Streptococcus pneumoniae
GCA_038994555.1	JBCEWZ000000000	SAMN40377938	STREP11A	Streptococcus pneumoniae
GCA_040327905.1	JBEPIH000000000	SAMN41896264	STREP23B	Streptococcus pneumoniae

SRA Data Details

Parameter	Value
Data volume, Gbases	8
Data volume, Mbytes	2407

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Streptococcus pneumoniae

WGS of Streptococcus pneumoniae Multiplexed Opsonophagocytic Assay (MOPA) strains

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