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Accession: PRJNA945017 ID: 945017

An innate immunity against Xanthomonas oryzae activated by ATM-mediated host DSB damage response in rice (Asian cultivated rice)

See Genome Information for Oryza sativa
We examined the transcriptional data in rice leaves of TOP6A3 overexpressed line (TOP6A3-OE1) with WT (K3) plants under normal growth. Overall design: RNA-seq
AccessionPRJNA945017; GEO: GSE227420
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismOryza sativa[Taxonomy ID: 4530]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
PublicationsXu Z et al., "The MRE11-ATM-SOG1 DNA damage signaling pathway confers rice immunity to Xanthomonas oryzae.", Plant Commun, 2024 Apr 8;5(4):100789
SubmissionRegistration date: 15-Mar-2023
Guangzhou city academy of agricultural sciences
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments4
Publications
PubMed1
PMC1
Other datasets
BioSample4
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes5
SRA Data Details
ParameterValue
Data volume, Gbases29
Data volume, Mbytes9384

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