U.S. flag

An official website of the United States government

Display Settings:

Format

Send to:

Choose Destination

Links from Protein

Accession: PRJNA308180 ID: 308180

GenomeTrakr Project: Environmental Salmonella isolates, Emory University - FDA-CFSAN

See Genome Information for Salmonella enterica
Whole genome sequencing of environmental Salmonella isolates - Emory University - FDA-CFSAN
AccessionPRJNA308180
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 7-Jan-2016
FDA
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)8113
WGS master161
Genomic DNA21
SRA Experiments177
Protein Sequences662296
Other datasets
BioSample174
Assembly170
Assembly details:
Assembly levelNumber of Assemblies
9
161
170
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_032207385.1ContigABNCSS000000000
SAMN34587850
CFSAN058519
GCA_032203585.1ContigABNCLY000000000
SAMN34566557
CFSAN058518
GCA_032203565.1ContigABNCLW000000000
SAMN34587800
CFSAN058521
GCA_032203525.1ContigABNCLX000000000
SAMN34587852
CFSAN058520
GCA_032203545.1ContigABNCLV000000000
SAMN34587790
CFSAN058549
GCA_006216565.1ContigAAEXFA000000000
SAMN11941236
CFSAN058550
GCA_006216525.1ContigAAEXEJ000000000
SAMN11940337
CFSAN058557
GCA_006216485.1ContigAAEXEY000000000
SAMN11942450
CFSAN058560
GCA_006216465.1ContigAAEXEL000000000
SAMN11940224
CFSAN058553
GCA_006216445.1ContigAAEXEW000000000
SAMN11942411
CFSAN058547
GCA_006216345.1ContigAAEXES000000000
SAMN11941241
CFSAN058558
GCA_006216215.1ContigAAEXER000000000
SAMN11940354
CFSAN058548
GCA_006215595.1ContigAAEXDF000000000
SAMN11940100
CFSAN058561
GCA_006295935.1ContigAAFBVX000000000
SAMN11942464
CFSAN058559
GCA_006295915.1ContigAAFBVN000000000
SAMN11942446
CFSAN058555
GCA_006295845.1ContigAAFBVT000000000
SAMN11942412
CFSAN058552
GCA_006295805.1ContigAAFBVM000000000
SAMN11942426
CFSAN058556
GCA_006295795.1ContigAAFBVK000000000
SAMN11941227
CFSAN058551
GCA_006295755.1ContigAAFBVP000000000
SAMN11941242
CFSAN058563
GCA_006295715.1ContigAAFBVL000000000
SAMN11941218
CFSAN058585
GCA_006295375.1ContigAAFBVG000000000
SAMN11940223
CFSAN058554
GCA_006292995.1ContigAAFBUO000000000
SAMN11940064
CFSAN058562
GCA_002241555.3ContigNLCA00000000
SAMN05195928
CFSAN051033
GCA_002682815.3ContigNMUD00000000
SAMN05195916
CFSAN051021
GCA_002241855.3ContigNLCH00000000
SAMN05195937
CFSAN051042
GCA_002263275.3ContigNOVO00000000
SAMN05195938
CFSAN051043
GCA_002263315.2ContigNOVM00000000
SAMN05195934
CFSAN051039
GCA_002263325.2ContigNOVN00000000
SAMN05195936
CFSAN051041
GCA_003579785.1ContigQWDO00000000
SAMN05195899
CFSAN051004
GCA_003579805.1ContigQWDP00000000
SAMN04962051
CFSAN044978
GCA_002263135.2ContigNOVL00000000
SAMN05195920
CFSAN051025
GCA_003431525.1ContigQVXM00000000
SAMN05195898
CFSAN051003
GCA_003431535.1ContigQVXN00000000
SAMN05195894
CFSAN050999
GCA_003431455.1ContigQVXI00000000
SAMN05195910
CFSAN051015
GCA_003431445.1ContigQVXL00000000
SAMN05195906
CFSAN051011
GCA_003431475.1ContigQVXJ00000000
SAMN05195909
CFSAN051014
GCA_003431465.1ContigQVXK00000000
SAMN05195908
CFSAN051013
GCA_003068635.1ContigQARB00000000
SAMN08824598
CFSAN058492
GCA_003068625.1ContigQARD00000000
SAMN08824585
CFSAN058490
GCA_003068605.1ContigQARC00000000
SAMN08824569
CFSAN058491
GCA_003068585.1ContigQAQZ00000000
SAMN08824565
CFSAN058494
GCA_003068565.1ContigQAQY00000000
SAMN08824444
CFSAN058495
GCA_003068545.1ContigQAQX00000000
SAMN08822999
CFSAN058496
GCA_003068525.1ContigQAQW00000000
SAMN08823165
CFSAN058497
GCA_003068505.1ContigQAQV00000000
SAMN08823124
CFSAN058498
GCA_003068485.1ContigQAQU00000000
SAMN08823106
CFSAN058499
GCA_003068465.1ContigQAQT00000000
SAMN08823151
CFSAN058502
GCA_003068445.1ContigQAQS00000000
SAMN08823453
CFSAN058503
GCA_003068415.1ContigQAQP00000000
SAMN08823283
CFSAN058506
GCA_003068405.1ContigQAQQ00000000
SAMN08823135
CFSAN058505
GCA_003068385.1ContigQAQR00000000
SAMN08824632
CFSAN058504
GCA_003068365.1ContigQAQM00000000
SAMN08824571
CFSAN058529
GCA_003068345.1ContigQAQL00000000
SAMN08824575
CFSAN058530
GCA_003068325.1ContigQAQN00000000
SAMN08822912
CFSAN058528
GCA_003068305.1ContigQAQJ00000000
SAMN08823126
CFSAN058532
GCA_003068285.1ContigQAQK00000000
SAMN08824566
CFSAN058531
GCA_003068265.1ContigQAQH00000000
SAMN08824579
CFSAN058534
GCA_003068235.1ContigQAQI00000000
SAMN08824588
CFSAN058533
GCA_003068225.1ContigQAQF00000000
SAMN08824617
CFSAN058536
GCA_003068205.1ContigQAQG00000000
SAMN08822977
CFSAN058535
GCA_003068175.1ContigQAQE00000000
SAMN08824614
CFSAN058537
GCA_003068165.1ContigQAQD00000000
SAMN08824592
CFSAN058538
GCA_003068125.1ContigQAQA00000000
SAMN08822956
CFSAN058541
GCA_003068105.1ContigQAQC00000000
SAMN08822938
CFSAN058539
GCA_003068055.1ContigQAPY00000000
SAMN08822659
CFSAN058543
GCA_003068045.1ContigQAPX00000000
SAMN08822673
CFSAN058544
GCA_003068065.1ContigQAPZ00000000
SAMN08823023
CFSAN058542
GCA_003068005.1ContigQAPV00000000
SAMN08822824
CFSAN058546
GCA_003067965.1ContigQAPT00000000
SAMN08822937
CFSAN058589
GCA_003067945.1ContigQAPS00000000
SAMN08822924
CFSAN058590
GCA_003067905.1ContigQAPQ00000000
SAMN08823297
CFSAN058592
GCA_003067855.1ContigQAPN00000000
SAMN08823472
CFSAN058595
GCA_003067845.1ContigQAPP00000000
SAMN08823272
CFSAN058593
GCA_003067865.1ContigQAPO00000000
SAMN08823046
CFSAN058594
GCA_003067825.1ContigQAPM00000000
SAMN08823245
CFSAN058596
GCA_003067785.1ContigQAPL00000000
SAMN08823155
CFSAN058597
GCA_003067795.1ContigQAPJ00000000
SAMN08823420
CFSAN058599
GCA_003067745.1ContigQAPI00000000
SAMN08823136
CFSAN058600
GCA_003064465.1ContigQARV00000000
SAMN08822881
CFSAN058602
GCA_003064445.1ContigQARU00000000
SAMN08822995
CFSAN058603
GCA_003064425.1ContigQART00000000
SAMN08823044
CFSAN058604
GCA_003064385.1ContigQARQ00000000
SAMN08822880
CFSAN058607
GCA_003064345.1ContigQARP00000000
SAMN08822779
CFSAN058609
GCA_003064325.1ContigQARO00000000
SAMN08822816
CFSAN058610
GCA_003064305.1ContigQARN00000000
SAMN08822658
CFSAN058611
GCA_003064285.1ContigQARM00000000
SAMN08822723
CFSAN058612
GCA_003064265.1ContigQARK00000000
SAMN08823270
CFSAN058615
GCA_003064245.1ContigQARJ00000000
SAMN08823259
CFSAN058616
GCA_003064215.1ContigQARG00000000
SAMN08823956
CFSAN058619
GCA_003064205.1ContigQARH00000000
SAMN08823082
CFSAN058618
GCA_003064175.1ContigQARI00000000
SAMN08823092
CFSAN058617
GCA_003069385.1ContigQBJX00000000
SAMN08888087
CFSAN058568
GCA_002241615.2ContigNLBP00000000
SAMN05195915
CFSAN051020
GCA_002241435.2ContigNLBM00000000
SAMN05195912
CFSAN051017
GCA_002241535.2ContigNLBX00000000
SAMN05195925
CFSAN051030
GCA_002241635.2ContigNLBQ00000000
SAMN05195917
CFSAN051022
GCA_003071045.1ContigQBVA00000000
SAMN08822913
CFSAN058608
GCA_003071025.1ContigQBVB00000000
SAMN08887230
CFSAN058576
GCA_003069345.1ContigQBJV00000000
SAMN08887233
CFSAN058570
GCA_003069325.1ContigQBJW00000000
SAMN08887258
CFSAN058569
GCA_003069305.1ContigQBJU00000000
SAMN08888086
CFSAN058571
GCA_003069285.1ContigQBJT00000000
SAMN08887557
CFSAN058572
GCA_003069245.1ContigQBJO00000000
SAMN08887259
CFSAN058578
GCA_003069255.1ContigQBJS00000000
SAMN08887917
CFSAN058573
GCA_003069225.1ContigQBJN00000000
SAMN08888246
CFSAN058579
GCA_003069205.1ContigQBJQ00000000
SAMN08886802
CFSAN058575
GCA_003069185.1ContigQBJM00000000
SAMN08888094
CFSAN058580
GCA_003069155.1ContigQBJK00000000
SAMN08888243
CFSAN058582
GCA_003069145.1ContigQBJG00000000
SAMN08887775
CFSAN058587
GCA_003069125.1ContigQBJF00000000
SAMN08823069
CFSAN058621
GCA_003069105.1ContigQBIT00000000
SAMN05195892
CFSAN050997
GCA_003069085.1ContigQBIS00000000
SAMN05195893
CFSAN050998
GCA_003069065.1ContigQBIR00000000
SAMN05195895
CFSAN051000
GCA_003069045.1ContigQBIP00000000
SAMN05195897
CFSAN051002
GCA_003069025.1ContigQBIO00000000
SAMN05195900
CFSAN051005
GCA_003069005.1ContigQBIL00000000
SAMN05195903
CFSAN051008
GCA_003068985.1ContigQBIJ00000000
SAMN05195905
CFSAN051010
GCA_003068965.1ContigQBIN00000000
SAMN05195901
CFSAN051006
GCA_003068935.1ContigQBJY00000000
SAMN08887254
CFSAN058567
GCA_003068925.1ContigQBJR00000000
SAMN08887916
CFSAN058574
GCA_003068905.1ContigQBJJ00000000
SAMN08888247
CFSAN058583
GCA_003068885.1ContigQBJP00000000
SAMN08887558
CFSAN058577
GCA_003068845.1ContigQBJL00000000
SAMN08888242
CFSAN058581
GCA_003068865.1ContigQBJH00000000
SAMN08887766
CFSAN058586
GCA_003068825.1ContigQBJI00000000
SAMN08888244
CFSAN058584
GCA_003068805.1ContigQBIQ00000000
SAMN05195896
CFSAN051001
GCA_003068765.1ContigQBIM00000000
SAMN05195902
CFSAN051007
GCA_003068775.1ContigQBIK00000000
SAMN05195904
CFSAN051009
GCA_003067725.1ContigQAPH00000000
SAMN08823152
CFSAN058601
GCA_003067505.1ContigQBII00000000
SAMN05195907
CFSAN051012
GCA_003067485.1ContigQBIH00000000
SAMN05195911
CFSAN051016
GCA_003067465.1ContigQBIF00000000
SAMN08886792
CFSAN058566
GCA_002241495.2ContigNLBS00000000
SAMN05195919
CFSAN051024
GCA_002241705.2ContigNLBT00000000
SAMN05195921
CFSAN051026
GCA_002241695.2ContigNLBY00000000
SAMN05195926
CFSAN051031
GCA_002241725.2ContigNLBV00000000
SAMN05195923
CFSAN051028
GCA_002241545.2ContigNLBW00000000
SAMN05195924
CFSAN051029
GCA_002241775.2ContigNLCC00000000
SAMN05195930
CFSAN051035
GCA_002241835.2ContigNLCG00000000
SAMN05195935
CFSAN051040
GCA_002241455.2ContigNLBN00000000
SAMN05195913
CFSAN051018
GCA_002241465.2ContigNLBR00000000
SAMN05195918
CFSAN051023
GCA_002241665.2ContigNLBO00000000
SAMN05195914
CFSAN051019
GCA_002241735.2ContigNLBZ00000000
SAMN05195927
CFSAN051032
GCA_002241515.2ContigNLBU00000000
SAMN05195922
CFSAN051027
GCA_002241795.2ContigNLCD00000000
SAMN05195931
CFSAN051036
GCA_002241595.2ContigNLCB00000000
SAMN05195929
CFSAN051034
GCA_002241655.2ContigNLCE00000000
SAMN05195932
CFSAN051037
GCA_002241805.2ContigNLCF00000000
SAMN05195933
CFSAN051038
GCA_003052425.1ContigQARA00000000
SAMN08824589
CFSAN058493
GCA_003052405.1ContigQAQO00000000
SAMN08822926
CFSAN058507
GCA_026579285.1ContigABJPYV000000000
SAMN31972477
CFSAN058516
GCA_026574295.1ContigABJPPI000000000
SAMN31972474
CFSAN058517
GCA_026576685.1ContigABJPTX000000000
SAMN31972750
CFSAN058500
GCA_026576745.1ContigABJPTZ000000000
SAMN31972748
CFSAN058501
GCA_026577385.1ContigABJPVJ000000000
SAMN31972479
CFSAN058515
GCA_026577115.1ContigABJPUU000000000
SAMN31972590
CFSAN058509
GCA_026576565.1ContigABJPTS000000000
SAMN31972822
CFSAN058522
GCA_026576185.1ContigABJPSX000000000
SAMN31972802
CFSAN058564
GCA_026576775.1ContigABJPUC000000000
SAMN31972746
CFSAN058513
GCA_026577225.1ContigABJPVA000000000
SAMN31972584
CFSAN058512
GCA_026577445.1ContigABJPVL000000000
SAMN31972481
CFSAN058514
GCA_003067765.2Complete genomeSAMN08823296
CFSAN058598
GCA_003064405.2Complete genomeSAMN08824419
CFSAN058605
GCA_003064365.2Complete genomeSAMN08822910
CFSAN058606
GCA_003064165.2Complete genomeSAMN08823084
CFSAN058620
GCA_003068145.2Complete genomeSAMN08822980
CFSAN058540
GCA_003068025.2Complete genomeSAMN08822719
CFSAN058545
GCA_003067445.2Complete genomeSAMN08886740
CFSAN058565
GCA_003067985.2Complete genomeSAMN08823090
CFSAN058588
GCA_003067925.2Complete genomeSAMN08824062
CFSAN058591
SRA Data Details
ParameterValue
Data volume, Gbases63
Data volume, Mbytes39226

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center