Six ixodid tick species (ID 633311) - BioProject

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Accession: PRJNA633311 ID: 633311

Six ixodid tick species

Large-scale comparative analyses of tick genomes elucidate their genetic diversity and vector capacities

Among arthropod vectors, ticks transmit the most diverse human and animal pathogens, leading to an increasing number of new challenges worldwide. More...

Accession	PRJNA633311
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Jia N et al., "Large-Scale Comparative Analyses of Tick Genomes Elucidate Their Genetic Diversity and Vector Capacities.", Cell, 2020 Sep 3;182(5):1328-1340.e13 Burger TD et al., "Molecular phylogeny of soft ticks (Ixodida: Argasidae) inferred from mitochondrial genome and nuclear rRNA sequences.", Ticks Tick Borne Dis, 2014 Mar;5(2):195-207
Submission	Registration date: 16-May-2020 TIGMIC Group - Beijing Institute of Microbiology and Epidemiology
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	11816
WGS master	6
Protein Sequences	165964
Publications
PubMed	2
Other datasets
BioSample	7
Assembly	6

Assembly details:

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Assembly level

Number of Assemblies

Chromosome

Scaffold

Total

5
1
6

Assembly	WGS	Chrs	BioSample	Isolate	Taxonomy
GCA_013339745.2	JABSTS000000000	12	SAMN14941059	Dsil-2018	Dermacentor silvarum
GCA_013339765.2	JABSTR000000000	12	SAMN14941058	HaeL-2018	Haemaphysalis longicornis
GCA_013339685.2	JABSTT000000000	12	SAMN14941060	Hyas-2018	Hyalomma asiaticum
GCA_013358835.2	JABSTQ000000000	1	SAMN14941057	Iper-2018	Ixodes persulcatus
GCA_013339725.1	JABSTU000000000	12	SAMN14941061	Rmic-2018	Rhipicephalus microplus
GCA_013339695.2	JABSTV000000000	12	SAMN14941062	Rsan-2018	Rhipicephalus sanguineus

Related Project Category: RefseqGenbank

PRJNA674874 : Dermacentor silvarum RefSeq Genome sequencing and assembly
PRJNA674886 : Rhipicephalus sanguineus RefSeq Genome sequencing and assembly
PRJNA856685 : Rhipicephalus sanguineus (brown dog tick)

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Six ixodid tick species

Large-scale comparative analyses of tick genomes elucidate their genetic diversity and vector capacities

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