Pelomyxa schiedti (ID 672820) - BioProject

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Accession: PRJNA672820 ID: 672820

We sequenced the genome and transcriptome of Pelomyxa schiedti, a free-living anaerobic amoeba of the Archamoebae group, and its symbionts. More...

Accession	PRJNA672820
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Treitli SC et al., "Hydrogenotrophic methanogenesis is the key process in the obligately syntrophic consortium of the anaerobic ameba Pelomyxa schiedti.", ISME J, 2023 Nov;17(11):1884-1894
Grants	"Centre for research of pathogenicity and virulence of parasites" (Grant ID CZ.02.1.01/0.0/0.0/16_019/0000759, Ministry of Education Youth and Sports of Czech Republic) "Life without mitochondrion" (Grant ID 771592, European Research Council)
Submission	Registration date: 28-Oct-2020 Charles University, BIOCEV
Relevance	Evolution

Project Data:

Assembly level

Number of Assemblies

1
1
2
4

Assembly	WGS	Chrs	BioSample	Infraspecies Id	Taxonomy
GCA_030920305.1	JARLUB000000000		SAMN33331048	SKADARSKE-1	Eubacteriales bacterium SKADARSKE-1
GCA_030919125.1		1	SAMN33331049	SKADARSKE-2	Methanoregula sp. SKADARSKE-2
GCA_020536535.1	JAHLWZ000000000		SAMN16578620	SKADARSKE	Pelomyxa schiedti
GCA_030920355.1	JARLUC000000000		SAMN33331050	SKADARSKE-3	Syntrophus sp. SKADARSKE-3

Parameter	Value
Data volume, Gbases	275
Data volume, Tbytes	0.12