ID 612761 - BioProject

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Accession: PRJNA612761 ID: 612761

Resequencing Western Australian isolates of the Septoria nodorum blotch Wheat pathogen.

Isolates of the fungal plant pathogen Parastagonospora nodorum were sequenced for population analysis and discovery of alleles associated with pathogenicity. More...

Accession	PRJNA612761
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Published online: Jones D et al., "Pathogenicity effector candidates and accessory genome revealed by pan-genomic analysis of Parastagonospora nodorum", bioRxiv, 2021;
Submission	Registration date: 16-Mar-2020 - Curtin University of Technology - AGRF - Novogene
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	92109
WGS master	153
SRA Experiments	344
Protein Sequences	2650843
Other datasets
BioSample	157
Assembly	153

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Total

153
153

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_020580155.1	JAIRJF000000000	SAMN14380990	15FG115	Parastagonospora nodorum
GCA_020579825.1	JAIRIY000000000	SAMN14381019	15FG28	Parastagonospora nodorum
GCA_020579845.1	JAIRJB000000000	SAMN14381004	15FG226	Parastagonospora nodorum
GCA_020580115.1	JAIRFV000000000	SAMN14380992	15FG117	Parastagonospora nodorum
GCA_020580075.1	JAIRJC000000000	SAMN14380994	15FG119	Parastagonospora nodorum
GCA_020580085.1	JAIRJD000000000	SAMN14380993	15FG118	Parastagonospora nodorum
GCA_020580425.1	JAIRJH000000000	SAMN14380987	15FG112	Parastagonospora nodorum
GCA_020580305.1	JAIRJG000000000	SAMN14380989	15FG114	Parastagonospora nodorum
GCA_020580415.1	JAIRFW000000000	SAMN14380988	15FG113	Parastagonospora nodorum
GCA_020581155.1	JAIRJN000000000	SAMN14381006	15FG100	Parastagonospora nodorum
GCA_020581275.1	JAIRJP000000000	SAMN14380958	14FG141	Parastagonospora nodorum
GCA_020580665.1	JAIRFY000000000	SAMN14381011	15FG105	Parastagonospora nodorum
GCA_020581165.1	JAIRJO000000000	SAMN14381032	15FG04	Parastagonospora nodorum
GCA_020580775.1	JAIRJL000000000	SAMN14381008	15FG102	Parastagonospora nodorum
GCA_020581045.1	JAIRJM000000000	SAMN14381007	15FG101	Parastagonospora nodorum
GCA_020580655.1	JAIRFX000000000	SAMN14380959	15FG109	Parastagonospora nodorum
GCA_020580905.1	JAIRFZ000000000	SAMN14381009	15FG103	Parastagonospora nodorum
GCA_020580695.1	JAIRJK000000000	SAMN14381010	15FG104	Parastagonospora nodorum
GCA_020580725.1	JAIRJJ000000000	SAMN14380965	15FG107	Parastagonospora nodorum
GCA_020580485.1	JAIRJI000000000	SAMN14380985	15FG110	Parastagonospora nodorum
GCA_020580145.1	JAIRJE000000000	SAMN14380991	15FG116	Parastagonospora nodorum
GCA_020571295.1	JAIRGU000000000	SAMN14380933	WAC13443	Parastagonospora nodorum
GCA_020571605.1	JAIRGW000000000	SAMN14380930	WAC13403	Parastagonospora nodorum
GCA_020571575.1	JAIRGV000000000	SAMN14380931	WAC13404	Parastagonospora nodorum
GCA_020570345.1	JAIRGM000000000	SAMN14380950	WAC13617	Parastagonospora nodorum
GCA_020571265.1	JAIREM000000000	SAMN14380934	WAC13446	Parastagonospora nodorum
GCA_020570975.1	JAIRGT000000000	SAMN14380935	WAC13447	Parastagonospora nodorum
GCA_020570935.1	JAIREL000000000	SAMN14380937	WAC13524	Parastagonospora nodorum
GCA_020570965.1	JAIRGS000000000	SAMN14380936	WAC13523	Parastagonospora nodorum
GCA_020572075.1	JAIRHA000000000	SAMN14380915	WAC13074	Parastagonospora nodorum
GCA_020570635.1	JAIRGP000000000	SAMN14380940	WAC13527	Parastagonospora nodorum
GCA_020571885.1	JAIRGY000000000	SAMN14380918	WAC13077	Parastagonospora nodorum
GCA_020571895.1	JAIREP000000000	SAMN14380917	WAC13076	Parastagonospora nodorum
GCA_020571545.1	JAIREO000000000	SAMN14380932	WAC13405	Parastagonospora nodorum
GCA_020571325.1	JAIREN000000000	SAMN14380906	WAC13418	Parastagonospora nodorum
GCA_020571815.1	JAIRGX000000000	SAMN14380929	WAC13402	Parastagonospora nodorum
GCA_020572645.1	JAIRHF000000000	SAMN14380909	WAC13068	Parastagonospora nodorum
GCA_020572395.1	JAIRHG000000000	SAMN14380926	S4FT3A	Parastagonospora nodorum
GCA_020572635.1	JAIRHE000000000	SAMN14380910	WAC13069	Parastagonospora nodorum
GCA_020572305.1	JAIRHC000000000	SAMN14380912	WAC13071	Parastagonospora nodorum
GCA_020571965.1	JAIRGZ000000000	SAMN14380916	WAC13075	Parastagonospora nodorum
GCA_020572315.1	JAIRHB000000000	SAMN14380913	WAC13072	Parastagonospora nodorum
GCA_020572345.1	JAIRHD000000000	SAMN14380911	WAC13070	Parastagonospora nodorum
GCA_020572205.1	JAIREQ000000000	SAMN14380914	WAC13073	Parastagonospora nodorum
GCA_020569285.1	JAIREC000000000	SAMN14381046	WAC13955	Parastagonospora nodorum
GCA_020568705.1	JAIRGF000000000	SAMN14380897	WAC4321	Parastagonospora nodorum
GCA_020568935.1	JAIRGH000000000	SAMN14380896	WAC2813	Parastagonospora nodorum
GCA_020569145.1	JAIREA000000000	SAMN14380894	WAC2285	Parastagonospora nodorum
GCA_020569235.1	JAIREB000000000	SAMN14380893	WAC2216	Parastagonospora nodorum
GCA_020569515.1	JAIRGJ000000000	SAMN14380954	WAC13666	Parastagonospora nodorum
GCA_020568945.1	JAIRDZ000000000	SAMN14380895	WAC2810	Parastagonospora nodorum
GCA_020569685.1	JAIRGK000000000	SAMN14380953	WAC13632	Parastagonospora nodorum
GCA_020569505.1	JAIREE000000000	SAMN14380955	WAC13667	Parastagonospora nodorum
GCA_020569895.1	JAIRGL000000000	SAMN14380952	WAC13631	Parastagonospora nodorum
GCA_020569485.1	JAIRGI000000000	SAMN14380957	WAC13691	Parastagonospora nodorum
GCA_020570015.1	JAIREG000000000	SAMN14380949	WAC13616	Parastagonospora nodorum
GCA_020570045.1	JAIREI000000000	SAMN14380945	WAC13532	Parastagonospora nodorum
GCA_020570415.1	JAIRGO000000000	SAMN14380942	WAC13529	Parastagonospora nodorum
GCA_020569495.1	JAIRED000000000	SAMN14380956	WAC13690	Parastagonospora nodorum
GCA_020569945.1	JAIREF000000000	SAMN14380951	WAC13630	Parastagonospora nodorum
GCA_020570395.1	JAIRGN000000000	SAMN14380944	WAC13531	Parastagonospora nodorum
GCA_020570405.1	JAIREJ000000000	SAMN14380943	WAC13530	Parastagonospora nodorum
GCA_020570355.1	JAIREH000000000	SAMN14380948	WAC13615	Parastagonospora nodorum
GCA_020570685.1	JAIRGQ000000000	SAMN14380939	WAC13526	Parastagonospora nodorum
GCA_020570525.1	JAIREK000000000	SAMN14380941	WAC13528	Parastagonospora nodorum
GCA_020570735.1	JAIRGR000000000	SAMN14380938	WAC13525	Parastagonospora nodorum
GCA_020568765.1	JAIRDY000000000	SAMN14380899	WAC4319	Parastagonospora nodorum
GCA_020568325.1	JAIRDU000000000	SAMN14380960	WAC740	Parastagonospora nodorum
GCA_020568775.1	JAIRGG000000000	SAMN14380898	WAC4303	Parastagonospora nodorum
GCA_020568635.1	JAIRDX000000000	SAMN14380901	WAC4648	Parastagonospora nodorum
GCA_020568465.1	JAIRDW000000000	SAMN14380900	WAC4808	Parastagonospora nodorum
GCA_020568055.1	JAIRGC000000000	SAMN14380902	WAC8390	Parastagonospora nodorum
GCA_020568415.1	JAIRDV000000000	SAMN14380964	WAC739	Parastagonospora nodorum
GCA_020568045.1	JAIRGB000000000	SAMN14380904	WAC8410	Parastagonospora nodorum
GCA_020568205.1	JAIRGE000000000	SAMN14380961	WAC741	Parastagonospora nodorum
GCA_020568095.1	JAIRGD000000000	SAMN14380903	WAC8384	Parastagonospora nodorum
GCA_020567955.1	JAIRGA000000000	SAMN14380905	WAC8635	Parastagonospora nodorum
GCA_020575975.1	JAIRFF000000000	SAMN14380969	201FG211	Parastagonospora nodorum
GCA_020576185.1	JAIRIQ000000000	SAMN14380967	201FG208	Parastagonospora nodorum
GCA_020575955.1	JAIRIO000000000	SAMN14380971	201FG218	Parastagonospora nodorum
GCA_020578445.1	JAIRIU000000000	SAMN14381017	15FG47	Parastagonospora nodorum
GCA_020578515.1	JAIRIV000000000	SAMN14381016	15FG38	Parastagonospora nodorum
GCA_020578615.1	JAIRIX000000000	SAMN14381020	15FG33	Parastagonospora nodorum
GCA_020578205.1	JAIRFS000000000	SAMN14381035	16FG159	Parastagonospora nodorum
GCA_020578375.1	JAIRFT000000000	SAMN14381018	15FG49	Parastagonospora nodorum
GCA_020578295.1	JAIRIT000000000	SAMN14381005	15FG99	Parastagonospora nodorum
GCA_020578315.1	JAIRIS000000000	SAMN14381033	16FG06	Parastagonospora nodorum
GCA_020578115.1	JAIRFR000000000	SAMN14381036	16FG160	Parastagonospora nodorum
GCA_020578105.1	JAIRFQ000000000	SAMN14381037	16FG161	Parastagonospora nodorum
GCA_020578095.1	JAIRFP000000000	SAMN14381038	16FG162	Parastagonospora nodorum
GCA_020578075.1	JAIRFO000000000	SAMN14381039	16FG163_2	Parastagonospora nodorum
GCA_020578085.1	JAIRFN000000000	SAMN14381040	16FG164	Parastagonospora nodorum
GCA_020577915.1	JAIRFM000000000	SAMN14381041	16FG165	Parastagonospora nodorum
GCA_020577855.1	JAIRFK000000000	SAMN14381043	16FG167	Parastagonospora nodorum
GCA_020577905.1	JAIRFL000000000	SAMN14381042	16FG166	Parastagonospora nodorum
GCA_020577805.1	JAIRFJ000000000	SAMN14381044	16FG168	Parastagonospora nodorum
GCA_020577795.1	JAIRFH000000000	SAMN14381047	16FG170	Parastagonospora nodorum
GCA_020578265.1	JAIRIR000000000	SAMN14381034	16FG158	Parastagonospora nodorum
GCA_020579855.1	JAIRFU000000000	SAMN14380966	15FG120	Parastagonospora nodorum
GCA_020579815.1	JAIRIZ000000000	SAMN14381014	15FG237	Parastagonospora nodorum
GCA_020579835.1	JAIRJA000000000	SAMN14381012	15FG229	Parastagonospora nodorum
GCA_020575995.1	JAIRIP000000000	SAMN14380968	201FG209	Parastagonospora nodorum
GCA_020576365.1	JAIRFI000000000	SAMN14381045	16FG169	Parastagonospora nodorum
GCA_020576195.1	JAIRFG000000000	SAMN14381048	16FG171	Parastagonospora nodorum
GCA_020575445.1	JAIRIJ000000000	SAMN14380974	203FG213	Parastagonospora nodorum
GCA_020575775.1	JAIRIN000000000	SAMN14380972	201FG219	Parastagonospora nodorum
GCA_020575485.1	JAIRIK000000000	SAMN14381002	202FG414	Parastagonospora nodorum
GCA_020575645.1	JAIRIM000000000	SAMN14380995	201FG49	Parastagonospora nodorum
GCA_020575615.1	JAIRIL000000000	SAMN14380973	202FG212	Parastagonospora nodorum
GCA_020575285.1	JAIRIF000000000	SAMN14380977	204FG222	Parastagonospora nodorum
GCA_020578585.1	JAIRIW000000000	SAMN14381015	15FG37	Parastagonospora nodorum
GCA_020574345.1	JAIREZ000000000	SAMN14380962	53FG143_2	Parastagonospora nodorum
GCA_020574145.1	JAIREW000000000	SAMN14381013	FGW003_5	Parastagonospora nodorum
GCA_020574155.1	JAIREX000000000	SAMN14381023	FG108	Parastagonospora nodorum
GCA_020574115.1	JAIRHU000000000	SAMN14380927	Gerald1	Parastagonospora nodorum
GCA_020573725.1	JAIREU000000000	SAMN14380922	Meck6	Parastagonospora nodorum
GCA_020574295.1	JAIRHV000000000	SAMN14381022	FG107	Parastagonospora nodorum
GCA_020574265.1	JAIREY000000000	SAMN14381021	FG106	Parastagonospora nodorum
GCA_020575375.1	JAIRIG000000000	SAMN14380976	204FG221	Parastagonospora nodorum
GCA_020575405.1	JAIRII000000000	SAMN14380996	203FG58	Parastagonospora nodorum
GCA_020575355.1	JAIRIH000000000	SAMN14380975	204FG214	Parastagonospora nodorum
GCA_020575195.1	JAIRIE000000000	SAMN14380978	204FG223	Parastagonospora nodorum
GCA_020574755.1	JAIRIA000000000	SAMN14380982	205FG225	Parastagonospora nodorum
GCA_020575035.1	JAIRFE000000000	SAMN14380980	205FG215_2	Parastagonospora nodorum
GCA_020574875.1	JAIRIC000000000	SAMN14380979	205FG215_1	Parastagonospora nodorum
GCA_020575105.1	JAIRID000000000	SAMN14381003	205FG142	Parastagonospora nodorum
GCA_020574715.1	JAIRFC000000000	SAMN14380983	206FG226	Parastagonospora nodorum
GCA_020574615.1	JAIRHZ000000000	SAMN14380998	205FG63	Parastagonospora nodorum
GCA_020574825.1	JAIRIB000000000	SAMN14380981	205FG216	Parastagonospora nodorum
GCA_020574725.1	JAIRFD000000000	SAMN14380997	205FG410	Parastagonospora nodorum
GCA_020574595.1	JAIRHX000000000	SAMN14380999	206FG66	Parastagonospora nodorum
GCA_020574385.1	JAIRFB000000000	SAMN14381000	206FG67	Parastagonospora nodorum
GCA_020574405.1	JAIRHY000000000	SAMN14380984	206FG227	Parastagonospora nodorum
GCA_020574365.1	JAIRHW000000000	SAMN14380963	53FG143_1	Parastagonospora nodorum
GCA_020574375.1	JAIRFA000000000	SAMN14381001	206FG68	Parastagonospora nodorum
GCA_020573325.1	JAIRET000000000	SAMN14381025	Nor_RAC2182_2	Parastagonospora nodorum
GCA_020572985.1	JAIRER000000000	SAMN14381030	Northam_Magenta	Parastagonospora nodorum
GCA_020572995.1	JAIRES000000000	SAMN14381029	Northam_Mace2	Parastagonospora nodorum
GCA_020572945.1	JAIRHJ000000000	SAMN14381031	Northam_WGT	Parastagonospora nodorum
GCA_020573275.1	JAIRHK000000000	SAMN14381028	Northam_Mace1	Parastagonospora nodorum
GCA_020572955.1	JAIRHI000000000	SAMN14380924	S1FT3A	Parastagonospora nodorum
GCA_020573285.1	JAIRHL000000000	SAMN14381027	Northam_Emu2	Parastagonospora nodorum
GCA_020573315.1	JAIRHM000000000	SAMN14381026	Northam_Emu1	Parastagonospora nodorum
GCA_020573595.1	JAIRHO000000000	SAMN14380947	Mur_S3	Parastagonospora nodorum
GCA_020572675.1	JAIRHH000000000	SAMN14380925	S1FT3B	Parastagonospora nodorum
GCA_020573605.1	JAIRHP000000000	SAMN14380946	Mur_51	Parastagonospora nodorum
GCA_020573625.1	JAIRHQ000000000	SAMN14380923	Meck8	Parastagonospora nodorum
GCA_020574055.1	JAIRHS000000000	SAMN14380919	Meck1	Parastagonospora nodorum
GCA_020574085.1	JAIRHT000000000	SAMN14380928	Gerald4	Parastagonospora nodorum
GCA_020573915.1	JAIRHR000000000	SAMN14380920	Meck3	Parastagonospora nodorum
GCA_020573495.1	JAIRHN000000000	SAMN14381024	Nor_RAC2182_1	Parastagonospora nodorum
GCA_020573765.1	JAIREV000000000	SAMN14380921	Meck5	Parastagonospora nodorum
GCA_020557385.1	JAIRDT000000000	SAMN14380907	WAC9178	Parastagonospora nodorum

SRA Data Details

Parameter	Value
Data volume, Gbases	342
Data volume, Tbytes	0.16

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Resequencing Western Australian isolates of the Septoria nodorum blotch Wheat pathogen.

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