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Accession: PRJNA558398 ID: 558398

Chromosomal recombination targets in Chlamydia interspecies lateral gene transfer

Genome sequence analysis has demonstrated that there is widespread lateral gene transfer among strains within the species C. More...
AccessionPRJNA558398
Data TypeGenome sequencing
ScopeMultispecies
Grants
  • "Functional genomics for Chlamydia" (Grant ID R01 AI126785, National Institute of Allergy and Infectious Diseases Extramural Activities)
SubmissionRegistration date: 2-Aug-2019
University of Kansas
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Genomic DNA)151
Protein Sequences138539
Other datasets
BioSample151
Assembly151
Assembly details:
Assembly levelNumber of Assemblies
151
151
AssemblyLevelChrsBioSampleStrainTaxonomy
GCA_021065065.1Complete genomeSAMN12476731
TC0080-IGR-TC0081::TncL2/tetR-1361
GCA_021065045.1Complete genomeSAMN12476755
TC0878::TnxL2/tetR-222
GCA_021054045.1Complete genomeSAMN12476745
TC0431::TnxL2/tetR-1673
GCA_021054025.1Complete genomeSAMN12476746
TC0189::TncL2/tetR-1692
GCA_021054005.1Complete genomeSAMN12476747
TC0189::TncL2/tetR-1696
GCA_021053985.1Complete genomeSAMN12476748
TC0431::TnxL2/tetR-1705
GCA_021053965.1Complete genomeSAMN12476749
KU2043
GCA_021053945.1Complete genomeSAMN12476750
TC0828::TncL2/tetR-2104
GCA_021053925.1Complete genomeSAMN12476751
TC0828::TncL2/tetR-2112
GCA_021053905.1Complete genomeSAMN12476752
TC0657::TnxL2/tetR-212
GCA_021053825.1Complete genomeSAMN12476753
KU2043c768-215
GCA_021053725.1Complete genomeSAMN12476754
TC0743::TncL2/tetR-2180
GCA_021053665.1Complete genomeSAMN12476756
TC0828::TncL2/tetR-2220
GCA_021053585.1Complete genomeSAMN12476757
TC0828::TncL2/tetR-2246
GCA_021053525.1Complete genomeSAMN12476758
TC0435::TncL2/tetR-225
GCA_021053445.1Complete genomeSAMN12476759
TC0189::TncL2/tetR-227
GCA_021053365.1Complete genomeSAMN12476760
TC0435::TncL2/tetR-228
GCA_021053265.1Complete genomeSAMN12476761
TC0302::TncL2/tetR-2343
GCA_021053245.1Complete genomeSAMN12476762
TC0189::TncL2/tetR-237
GCA_021053225.1Complete genomeSAMN12476763
TC0530::TncL2/tetR-2414
GCA_021053205.1Complete genomeSAMN12476764
TC0530::TncL2/tetR-2415
GCA_021053185.1Complete genomeSAMN12476765
TC0530::TncL2/tetR-2418
GCA_021053165.1Complete genomeSAMN12476766
TC0530::TncL2/tetR-2435
GCA_021053145.1Complete genomeSAMN12476767
TC0530::TncL2/tetR-2457
GCA_021053125.1Complete genomeSAMN12476768
TC0610::TnxL2/tetR-254
GCA_021053105.1Complete genomeSAMN12476769
TC0431::TnxL2/tetR-259
GCA_021053085.1Complete genomeSAMN12476770
TC0657::TnxL2/tetR-26
GCA_021053065.1Complete genomeSAMN12476771
TC0212::TncL2/tetR-2649
GCA_021053045.1Complete genomeSAMN12476772
TC0326::TnxL2/tetR-27
GCA_021053005.1Complete genomeSAMN12476773
TC0302::TncL2/tetR-28
GCA_021052945.1Complete genomeSAMN12476774
TC0189::TncL2/tetR-299
GCA_021052865.1Complete genomeSAMN12476775
TC0257::TnxL2/tetR-301
GCA_021052745.1Complete genomeSAMN12476776
TC0865-IGR-TC0866::TncL2/tetR-302
GCA_021056265.1Complete genomeSAMN12498716
TC0350::TncL2/tetR-936
GCA_021056245.1Complete genomeSAMN12476707
TC0411::TnxD/tetR-103
GCA_021056165.1Complete genomeSAMN12476708
TC0431::TnxD/tetR-106
GCA_021056065.1Complete genomeSAMN12476709
TC0411:TnxD/tetR-296
GCA_021055945.1Complete genomeSAMN12476710
TC0031::TnxL2/rifR-38
GCA_021055925.1Complete genomeSAMN12476711
TC0080-IGR-TC0081::TncL2/tetR-1005
GCA_021055905.1Complete genomeSAMN12476712
TC0438::TncL2/tetR-101
GCA_021055885.1Complete genomeSAMN12476713
TC0189::TncL2/tetR-102
GCA_021055865.1Complete genomeSAMN12476714
TC0080-IGR-TC0081::TncL2/tetR-1029
GCA_021055845.1Complete genomeSAMN12476715
TC0080-IGR-TC0081::TncL2/tetR-1034
GCA_021055825.1Complete genomeSAMN12476716
TC0411::TncL2/tetR-104
GCA_021055805.1Complete genomeSAMN12476717
TC0080-IGR-TC0081::TncL2/tetR-1046
GCA_021055785.1Complete genomeSAMN12476718
TC0411::TncL2/tetR-109
GCA_021055765.1Complete genomeSAMN12476719
TC0080-IGR-TC0081::TncL2/tetR-1113
GCA_021055745.1Complete genomeSAMN12476720
TC0080-IGR-TC0081::TncL2/tetR-1121
GCA_021055725.1Complete genomeSAMN12476721
TC0080-IGR-TC0081::TncL2/tetR-1123
GCA_021055705.1Complete genomeSAMN12476722
TC0431::TnxL2/tetR-1201
GCA_021055685.1Complete genomeSAMN12476723
TC0257::TnxL2/tetR-1203
GCA_021055645.1Complete genomeSAMN12476724
TC0431::TnxL2/tetR-1219
GCA_021055525.1Complete genomeSAMN12476725
TC0431::TnxL2/tetR-1224
GCA_021055425.1Complete genomeSAMN12476726
TC0610::TnxL2/tetR-127
GCA_021055365.1Complete genomeSAMN12476727
TC0431::TnxL2/tetR-1306
GCA_021055305.1Complete genomeSAMN12476728
TC0431::TnxL2/tetR-1323
GCA_021055185.1Complete genomeSAMN12476729
TC0080-IGR-TC0081::TncL2/tetR-1324
GCA_021055065.1Complete genomeSAMN12476730
TC0189::TncL2/tetR-1343
GCA_021055045.1Complete genomeSAMN12476732
KU2043c768-137
GCA_021055025.1Complete genomeSAMN12476733
TC0411::TncL2/tetR-138
GCA_021055005.1Complete genomeSAMN12476734
TC0080-IGR-TC0081::TncL2/tetR-1393
GCA_021054985.1Complete genomeSAMN12476735
TC0610::TnxL2/tetR-14
GCA_021054965.1Complete genomeSAMN12476736
KU2043c104-141
GCA_021054945.1Complete genomeSAMN12476737
TC0431::TnxL2/tetR-1420
GCA_021054925.1Complete genomeSAMN12476738
TC0189::TncL2/tetR-145
GCA_021054905.1Complete genomeSAMN12476739
TC0189::TncL2/tetR-1503
GCA_021054885.1Complete genomeSAMN12476740
TC0431::TnxL2/tetR-1540
GCA_021054865.1Complete genomeSAMN12476741
TC0431::TnxL2/tetR-1557
GCA_021054845.1Complete genomeSAMN12476742
TC0431::TnxL2/tetR-1560
GCA_021054825.1Complete genomeSAMN12476743
TC0080-IGR-TC0081::TncL2/tetR-1645
GCA_021054805.1Complete genomeSAMN12476744
TC0189::TncL2/tetR-1650
GCA_021052225.1Complete genomeSAMN12476777
TC0189::TncL2/tetR-307
GCA_021052205.1Complete genomeSAMN12476778
KU3106
GCA_021052185.1Complete genomeSAMN12476779
TC0189::TncL2/tetR-317
GCA_021052165.1Complete genomeSAMN12476780
TC0865-IGR-TC0866::TncL2/tetR-322
GCA_021052145.1Complete genomeSAMN12476781
KU3220
GCA_021052125.1Complete genomeSAMN12476782
TC0878::TnxL2/tetR-336
GCA_021052105.1Complete genomeSAMN12476783
TC0189::TncL2/tetR-346
GCA_021047765.1Complete genomeSAMN12476842
TC0259::TnxL2/tetR-744
GCA_021047745.1Complete genomeSAMN12476846
KU2043c259-8014
GCA_021047725.1Complete genomeSAMN12476847
TC0431::TnxL2/tetR-813
GCA_021047685.1Complete genomeSAMN12476851
TC0431::TnxL2/tetR-836
GCA_021047645.1Complete genomeSAMN12476852
TC0431::TnxL2/tetR-881
GCA_021047525.1Complete genomeSAMN12476854
D_tet3
GCA_021047405.1Complete genomeSAMN12476855
L2_rif74
GCA_021052085.1Complete genomeSAMN12476784
TC0865-IGR-TC0866::TncL2/tetR-347
GCA_021052065.1Complete genomeSAMN12476785
TC0743::TncL2/tetR-348
GCA_021052045.1Complete genomeSAMN12476786
TC0693::TncL2/tetR-3501
GCA_021051985.1Complete genomeSAMN12476787
TC0693::TncL2/tetR-3509
GCA_021051865.1Complete genomeSAMN12476788
TC0693::TncL2/tetR-3516
GCA_021051745.1Complete genomeSAMN12476789
TC0693::TncL2/tetR-3536
GCA_021051725.1Complete genomeSAMN12476790
TC0212::TncL2/tetR-3539
GCA_021051705.1Complete genomeSAMN12476791
TC0693::TncL2/tetR-3543
GCA_021051685.1Complete genomeSAMN12476792
TC0693::TncL2/tetR-3549
GCA_021051665.1Complete genomeSAMN12476793
TC0693::TncL2/tetR-3557
GCA_021051645.1Complete genomeSAMN12476794
TC0693::TncL2/tetR-3566
GCA_021051625.1Complete genomeSAMN12476795
TC0693::TncL2/tetR-3572
GCA_021051605.1Complete genomeSAMN12476796
TC0693::TncL2/tetR-3580
GCA_021051585.1Complete genomeSAMN12476797
TC0693::TncL2/tetR-3583
GCA_021051565.1Complete genomeSAMN12476798
TC0693::TncL2/tetR-3594
GCA_021051545.1Complete genomeSAMN12476799
TC0212::TncL2/tetR-3660
GCA_021051525.1Complete genomeSAMN12476800
TC0212::TncL2/tetR-3666
GCA_021051505.1Complete genomeSAMN12476801
TC0212::TncL2/tetR-3686
GCA_021051485.1Complete genomeSAMN12476802
TC0212::TncL2/tetR-3694
GCA_021051385.1Complete genomeSAMN12476803
TC0610::TnxL2/tetR-373
GCA_021051285.1Complete genomeSAMN12476804
TC0693::TncL2/tetR-3750
GCA_021051185.1Complete genomeSAMN12476805
TC0435::TncL2/tetR-376
GCA_021051165.1Complete genomeSAMN12476806
TC0693::TncL2/tetR-3767
GCA_021051105.1Complete genomeSAMN12476807
TC0693::TncL2/tetR-3772
GCA_021050985.1Complete genomeSAMN12476808
TC0693::TncL2/tetR-3796
GCA_021050865.1Complete genomeSAMN12476809
TC0019-IGR-TC0020::TncL2/tetR-3814
GCA_021050845.1Complete genomeSAMN12476810
TC0019-IGR-TC0020::TncL2/tetR-3834
GCA_021050825.1Complete genomeSAMN12476811
TC0693::TncL2/tetR-3837
GCA_021050805.1Complete genomeSAMN12476812
TC0435::TncL2/tetR-39
GCA_021050785.1Complete genomeSAMN12476813
TC0657::TnxL2/tetR-403
GCA_021050765.1Complete genomeSAMN12476814
TC0080-IGR-TC0081::TncL2/tetR-4102
GCA_021050745.1Complete genomeSAMN12476815
TC0865-IGR-TC0866::TncL2/tetR-412
GCA_021050725.1Complete genomeSAMN12476816
TC0080-IGR-TC0081::TncL2/tetR-4120
GCA_021050705.1Complete genomeSAMN12476817
TC0657::TnxL2/tetR-415
GCA_021050685.1Complete genomeSAMN12476818
TC0080-IGR-TC0081::TncL2/tetR-4202
GCA_021050665.1Complete genomeSAMN12476819
TC0080-IGR-TC0081::TncL2/tetR-4227
GCA_021050645.1Complete genomeSAMN12476820
TC0080-IGR-TC0081::TncL2/tetR-4243
GCA_021050625.1Complete genomeSAMN12476821
TC0435::TncL2/tetR-427
GCA_021050605.1Complete genomeSAMN12476822
TC0435::TncL2/tetR-435
GCA_021050585.1Complete genomeSAMN12476823
TC0259::TnxL2/tetR-458
GCA_021050565.1Complete genomeSAMN12476824
TC0865-IGR-TC0866::TncL2/tetR-473
GCA_021050545.1Complete genomeSAMN12476825
TC0438::TncL2/tetR-49
GCA_021050525.1Complete genomeSAMN12476826
TC0865-IGR-TC0866::TncL2/tetR-499
GCA_021050505.1Complete genomeSAMN12476827
TC0610::TnxL2/tetR-14xCM - 53
GCA_021050425.1Complete genomeSAMN12476828
TC0575::TncL2/tetR-6008
GCA_021050285.1Complete genomeSAMN12476829
TC0575::TncL2/tetR-6041
GCA_021050205.1Complete genomeSAMN12476830
TC0575::TncL2/tetR-6088
GCA_021050185.1Complete genomeSAMN12476831
TC0913-IGR-TC0914::TncL2/tetR-6309
GCA_021050165.1Complete genomeSAMN12476832
TC0913-IGR-TC0914::TncL2/tetR-6353
GCA_021050145.1Complete genomeSAMN12476833
TC0913-IGR-TC0914::TncL2/tetR-6362
GCA_021050125.1Complete genomeSAMN12476834
TC0913-IGR-TC0914::TncL2/tetR-6389
GCA_021050105.1Complete genomeSAMN12476835
TC0657::TnxL2/tetR-658
GCA_021050065.1Complete genomeSAMN12476836
TC0693::TncL2/tetR-6801
GCA_021049945.1Complete genomeSAMN12476837
TC0693::TncL2/tetR-6833
GCA_021049805.1Complete genomeSAMN12476838
TC0693::TncL2/tetR-6882
GCA_021049745.1Complete genomeSAMN12476839
TC0693::TncL2/tetR-6903
GCA_021049625.1Complete genomeSAMN12476840
TC0693::TncL2/tetR-6936
GCA_021049505.1Complete genomeSAMN12476841
TC0431::TnxL2/tetR-734
GCA_021049485.1Complete genomeSAMN12476843
TC0431::TnxL2/tetR-745
GCA_021049465.1Complete genomeSAMN12476844
TC0431::TnxL2/tetR-768
GCA_021049445.1Complete genomeSAMN12476845
KU2043c259-8001
GCA_021049425.1Complete genomeSAMN12476848
TC0431::TnxL2/tetR-821
GCA_021049405.1Complete genomeSAMN12476849
TC0431::TnxL2/tetR-826
GCA_021049385.1Complete genomeSAMN12476850
TC0431::TnxL2/tetR-831
GCA_021049365.1Complete genomeSAMN12476853
TC0657::TnxL2/tetR-9
GCA_021049345.1Complete genomeSAMN12476856
TC0431::TnxL2/tetR-269

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