Leptospira (ID 528695) - BioProject

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Accession: PRJNA528695 ID: 528695

Leptospira

Sri Lankan Leptospira Genome sequencing and assembly

This is a collaborative project to culture, isolation and genomic analysis of Sri Lankan Leptospira isolates

Accession	PRJNA528695
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Leptospira[Taxonomy ID: 171] Bacteria; Spirochaetota; Spirochaetia; Leptospirales; Leptospiraceae; Leptospira
Publications	Senevirathna I et al., "Complete Genome Sequence of Leptospira interrogans Strains FMAS_KW1, FMAS_KW2 and FMAS_AW1 Isolated from Leptospirosis Patients from Karawanalla and Awissawella, Sri Lanka.", J Genomics, 2020;8:49-52
Grants	"Addressing the Global Burden of Leptospirosis in Two Endemic Countries" (Grant ID U19 AI115658, National Institute of Allergy and Infectious Diseases Extramural Activities)
Submission	Registration date: 7-May-2019 Rajarata University of Sri lanka
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic DNA)	99
Protein Sequences	94350
Publications
PubMed	1
PMC	1
Other datasets
BioSample	25
Assembly	25

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Total

25
25

Assembly	Chrs	BioSample	Strain	Taxonomy
GCA_018399095.1	2	SAMN11919593	FMAS_PN4	Leptospira borgpetersenii
GCA_018402845.1	2	SAMN11919585	FMAS_AP3	Leptospira borgpetersenii
GCA_018402825.1	2	SAMN11919584	FMAS_AP2	Leptospira borgpetersenii
GCA_018402805.1	2	SAMN11919595	FMAS_AP9	Leptospira borgpetersenii
GCA_018402785.1	2	SAMN11919594	FMAS_AP8	Leptospira borgpetersenii
GCA_018403825.1	2	SAMN11919586	FMAS_AP4	Leptospira borgpetersenii
GCA_018403805.1	2	SAMN11919590	FMAS_PN1	Leptospira borgpetersenii
GCA_005222565.1	3	SAMN11289419	FMAS_KW1	Leptospira interrogans
GCA_005222625.1	4	SAMN11289421	FMAS_AW1	Leptospira interrogans
GCA_005222585.1	2	SAMN11289420	FMAS_KW2	Leptospira interrogans
GCA_024526695.1	3	SAMN11919592	FMAS_PN3	Leptospira interrogans
GCA_022453745.1	8	SAMN11919581	FMAS_KG1	Leptospira interrogans
GCA_022453725.1	5	SAMN11919577	FMAS_AW3	Leptospira interrogans
GCA_022453705.1	4	SAMN11919583	FMAS_AP1	Leptospira interrogans
GCA_022488465.1	7	SAMN11919579	FMAS_PD1	Leptospira interrogans
GCA_022488445.1	5	SAMN11919576	FMAS_AW2	Leptospira interrogans
GCA_022559725.1	7	SAMN11919582	FMAS_KG2	Leptospira interrogans
GCA_022343825.1	5	SAMN11919578	FMAS_RT2	Leptospira interrogans
GCA_022343805.1	5	SAMN11919587	FMAS_AP5	Leptospira interrogans
GCA_022343785.1	5	SAMN11919588	FMAS_AP6	Leptospira interrogans
GCA_022343765.1	4	SAMN11919589	FMAS_AP7	Leptospira interrogans
GCA_022343745.1	3	SAMN11919591	FMAS_PN2	Leptospira interrogans
GCA_024526015.1	5	SAMN11919596	FMAS_PN5	Leptospira kirschneri
GCA_022453935.2	5	SAMN11919575	FMAS_RT1	Leptospira weilii
GCA_022344045.1	5	SAMN11919580	FMAS_PD2	Leptospira weilii

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Leptospira

Sri Lankan Leptospira Genome sequencing and assembly

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