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Accession: PRJNA270892 ID: 270892

PREDICT, the surveillance and virus discovery component of the Emerging Pandemic Threats program

The PREDICT project is a part of the United States Agency for International Development's (USAID) Emerging Pandemic Threats (EPT) program lead by the One Health Institute at the University of California, Davis, School of Veterinary Medicine in a consortium with EcoHealth Alliance, Metabiota, Smithsonian Institution and the Wildlife Conservation Society; focusing on pathogen surveillance, viral discovery and global health capacity strengthening in more than 20 countries. USAID initiated the Emerging Pandemic Threats program in 2009 with the goal of strengthening capacities in developing countries to prevent, detect, and control infectious diseases. PREDICT, the surveillance and virus discovery component of the EPT program, focuses on building capacity to identify potential zoonotic viral threats at high-risk wildlife-human pathogen transmission interfaces where diseases are most likely to emerge. More...

AccessionPRJNA270892
TypeUmbrella project
Publications (total 5)
  • Wells HL et al., "Classification of new morbillivirus and jeilongvirus sequences from bats sampled in Brazil and Malaysia.", Arch Virol, 2022 Oct;167(10):1977-1987
More...
Grants
  • "PREDICT" (Grant ID AID-OAA-A-14-00102, United States Agency for International Development)
SubmissionRegistration date: 19-Dec-2014
PREDICT Consortium
Related Resources
RelevancePublic Health
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)8413
Genomic DNA1038
Genomic RNA5972
Transcript1403
SRA Experiments25
Protein Sequences8441
Publications
PubMed10
PMC10
Other datasets
BioSample25
PopSet76
Assembly7
SRA Data Details
ParameterValue
Data volume, Gbases107
Data volume, Mbytes41965
This project encompasses the following 16 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
SRA or Trace
No data links
Total

3
5
8
BioProject
accession
Assembly
level
OrganismTitle
PRJNA294191 No data linksArenaviridaeArenavirus family project (PREDICT Consortium)
PRJNA294192 No data linksArteriviridaeArterivirus family project (PREDICT Consortium)
PRJNA292894 No data linksAstroviridaeAstrovirus family project (PREDICT Consortium)
PRJNA292888 SRA or TraceCoronaviridaeCoronavirus family project (PREDICT Consortium)
PRJNA282681 SRA or TraceFiloviridaeFilovirus family project (PREDICT Consortium)
List all 8 'Genome sequencing' projects...
targeted loci8
BioProject
accession
OrganismTitle
PRJNA292889AdenoviridaeAdenovirus family project (PREDICT Consortium)
PRJNA292890HerpesviridaeHerpesvirus family project (PREDICT Consortium)
PRJNA292887PapillomaviridaePapillomavirus family project (PREDICT Consortium)
PRJNA292898ParvoviridaeParvovirus family project (PREDICT Consortium)
PRJNA288590PicobirnaviridaePicobirnavirus family project (PREDICT Consortium)
List all 8 'targeted loci' projects...

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