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Links from Protein

Accession: PRJDB1747 ID: 245403

Oryza sativa Japonica Group strain:Nipponbare (Japanese rice)

Update of genome assembly of Oryza sativa L. Nipponbare (Os-Nipponbare-Reference-IRGSP-1.0)

See Genome Information for Oryza sativa
The Nipponbare genome assembly was updated by revising and validating the minimal tiling path of clones with the optical map for rice. More...
AccessionPRJDB1747
Data TypeGenome sequencing
ScopeMonoisolate
OrganismOryza sativa Japonica Group[Taxonomy ID: 39947]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa Japonica Group
Publications
  • Kawahara Y et al., "Improvement of the Oryza sativa Nipponbare reference genome using next generation sequence and optical map data.", Rice (N Y), 2013 Feb 6;6(1):4
  • Sakai H et al., "Rice Annotation Project Database (RAP-DB): an integrative and interactive database for rice genomics.", Plant Cell Physiol, 2013 Feb;54(2):e6
SubmissionRegistration date: 10-Oct-2015
National Institute of Agrobiological Sciences
Related Resources
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Genomic DNA)55
Protein Sequences48407
Publications
PubMed2
PMC2
Other datasets
BioSample1
Assembly1
Related RefSeq Project
PRJNA122 : Whole genome RefSeq project for Oryza sativa japonica group

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