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Accession: PRJNA680492 ID: 680492

RNAseq and quantitative proteomic analysis of Dictyostelium knock-out cells lacking the core autophagy proteins ATG9 and/or ATG16

See Genome Information for Dictyostelium discoideum
Purpose: Global survey of the transcriptome and comparison to the proteome in autophagy-deficient strains of D. More...
AccessionPRJNA680492; GEO: GSE162070
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismDictyostelium discoideum[Taxonomy ID: 44689]
Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum
PublicationsXiong Q et al., "RNA(seq) and quantitative proteomic analysis of Dictyostelium knock-out cells lacking the core autophagy proteins ATG9 and/or ATG16.", BMC Genomics, 2021 Jun 15;22(1):444
SubmissionRegistration date: 24-Nov-2020
Cellular Homeostasis, Biochemistry Medical Faculty, Centre for Biochemistry Medical Faculty University of Cologne
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments36
Publications
PubMed1
PMC1
Other datasets
BioSample36
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes4
SRA Data Details
ParameterValue
Data volume, Gbases122
Data volume, Mbytes62667

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