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Accession: PRJNA406979 ID: 406979

Mastomys (multimammate rats)

Whole genome sequencing of Mastomys coucha and M. natalensis Genome sequencing and assembly

Mastomys are important models for gastric cancer, skin cancer, and mammary evolution as well as hosts for Lassa virus and the plague
AccessionPRJNA406979
Data TypeGenome sequencing and assembly
ScopeMultispecies
OrganismMastomys[Taxonomy ID: 30639]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mastomys
PublicationsHardin A et al., "Comparative Genomic Characterization of the Multimammate Mouse Mastomys coucha.", Mol Biol Evol, 2019 Dec 1;36(12):2805-2812
Grants
  • "UCSF IRACDA Scholars Program" (Grant ID K12 GM081266, National Institute of General Medical Sciences)
SubmissionRegistration date: 23-Sep-2019
University of California, San Francisco
RelevanceModel Organism
Locus Tag PrefixCQR33
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)3
WGS master1
SRA Experiments12
Publications
PubMed1
PMC1
Other datasets
BioSample3
Assembly1
SRA Data Details
ParameterValue
Data volume, Gbases375
Data volume, Tbytes0.17
Related Project Category: RefseqGenbank
PRJNA578167 : Mastomys RefSeq Genome sequencing and assembly

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