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Organizing biological data

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Select item 10961391.

West Nile virus

West Nile virus Raw sequence reads

Taxonomy:: West Nile virus

: Project data type: Raw sequence reads

Scope:: Multiisolate

Centro Servizi Laboratorio Unico AUSL Romagna

Accession:: PRJNA1096139
ID:: 1096139

Select item 10734242.

Viral RNA sequencing

: Project data type: Raw sequence reads

Scope:: Multispecies

University Hospitals of Geneva

Accession:: PRJNA1073424
ID:: 1073424

Select item 10351183.

West Nile virus

West Nile virus Genome sequences from Southwest United States

Taxonomy:: West Nile virus

: Project data type: Genome sequencing

Scope:: Monoisolate

TGen North

Accession:: PRJNA1035118
ID:: 1035118

Select item 9415844.

West Nile virus, Germany, 2020

Update on the West Nile virus situation in Germany in 2020

: Project data type: Genome sequencing

Scope:: Monoisolate

Friedrich-Loeffler-Institut

Accession:: PRJEB47687
ID:: 941584

Select item 9130165.

West Nile Virus surveillance sampling in Rhode Island

: Project data type: Raw sequence reads

Scope:: Multispecies

Rhode Island State Health Laboratory

Accession:: PRJNA913016
ID:: 913016

Select item 9095396.

Characterization of mutations in West Nile virus NS4B protein identifies proline residue 54 as a determinant of attenuation

: Project data type: Other

Scope:: Monoisolate

European Bioinformatics Institute

Accession:: PRJEB39655
ID:: 909539

Select item 8401967.

Arbovirus sequencing platform comparison

A comparison of sequencing platforms and approaches for arbovirus sequencing

: Project data type: Other

Scope:: Monoisolate

ERASMUS MC, UNIVERISTY MEDICAL CENTER

Accession:: PRJEB47177
ID:: 840196

Select item 8306628.

small RNA sequencing of flavivirus infected Aedes albopictus cells

: Project data type: Raw sequence reads

Scope:: Multispecies

RadboudUMC

Accession:: PRJNA830662
ID:: 830662

Select item 7832529.

Usutu virus/West Nile virus co-infections in birds

Co-Infection: Simultaneous Detection of West Nile Virus and Usutu Virus in Birds from Germany

: Project data type: Genome sequencing

Scope:: Monoisolate

Friedrich-Loeffler-Institut

Accession:: PRJEB41417
ID:: 783252

Select item 76600310.

CCHFV, WNV and Zika virus transcriptome sequencing by Oxford Nanopore Technologies (MinION)

Transcriptome sequencing of CCHFV, WNV and Zika virus

: Project data type: Other

Scope:: Monoisolate

UNIVERSITY OF SZEGED

Accession:: PRJEB46591
ID:: 766003

Select item 75939311.

West Nile virus reference strains

: Project data type: Raw sequence reads

Scope:: Multispecies

Paul Ehrlich Institute

Accession:: PRJNA759393
ID:: 759393

Select item 71542312.

wnv_outbreak_andalusia_2020

Phylogenetic analysis of the 2020 West Nile virus (WNV) outbreak in Andalusia (Spain)

: Project data type: Other

Scope:: Monoisolate

Clinical Bioinformatics Area

Accession:: PRJEB43037
ID:: 715423

Select item 65581313.

West Nile virus

West Nile virus Genome sequencing and assembly

Taxonomy:: West Nile virus

: Project data type: Genome sequencing and assembly

Scope:: Multiisolate

ANSES

Accession:: PRJNA655813
ID:: 655813

Select item 64324714.

Metagenomic Next Generation Sequencing Based Viral Detection in Cerebrospinal Fluid of Pediatric Patients with Encephalitis

: Project data type: Raw sequence reads

Scope:: Multispecies

Abigail Wexner Research Institute at Nationwide Children's Hospital

Accession:: PRJNA643247
ID:: 643247

Select item 63754815.

Analysis of the West Nile Virus Outbreak in Germany 2018-2019

: Project data type: Genome sequencing

Scope:: Monoisolate

Friedrich-Loeffler-Institut

Accession:: PRJEB35552
ID:: 637548

Select item 57881616.

Different RNA Virus species

Metagenomic sequencing with spiked primer enrichment (MSSPE)

: Project data type: Raw sequence reads

Scope:: Multispecies

NIH

Accession:: PRJNA578816
ID:: 578816

Select item 52236017.

Deep sequencing of WNV isolates collected in Harris County, TX 2013-2016

Taxonomy:: West Nile virus

: Project data type: Other

Scope:: Multiisolate

Alan Barrett, Experimental Pathology, University of Texas Medical Branch

Accession:: PRJNA522360
ID:: 522360

Select item 48066218.

Phylogenetic analysis of West Nile virus in Quebec, Canada, 2004–2016: Co-circulation of distinct variants harbouring conserved amino acid motifs in North America

: Project data type: Genome sequencing

Scope:: Multispecies

Laboratoire de sante publique du Quebec

Accession:: PRJNA480662
ID:: 480662

Select item 47298119.

West Nile virus

West Nile virus genomic data from California

Taxonomy:: West Nile virus

: Project data type: Genome sequencing

Scope:: Multiisolate

The Scripps Research Institute

Accession:: PRJNA472981
ID:: 472981

Select item 45489920.

Deep Sequencing of West Nile virus collected in Harris County 2013-2016

: Project data type: Raw sequence reads

Scope:: Multispecies

University of Texas Medical Branch

Accession:: PRJNA454899
ID:: 454899

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