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Items: 1 to 20 of 62

1.

mNGS of 10 filovirus strains

Project data type: Raw sequence reads
Scope:
Multispecies
University of Washington
Accession:
PRJNA1095911
ID:
1095911

2.

Recombinant EBOV (rEBOV-ZsGreen)

Project data type: Raw sequence reads
Scope:
Multispecies
Boston University
Accession:
PRJNA1071083
ID:
1071083

3.

Filovirus sequencing

Project data type: Raw sequence reads
Scope:
Multispecies
Robert Koch institute
Accession:
PRJNA1001398
ID:
1001398

4.

Ebola virus

Linked variations in the Ebola virus polymerase are associated with organ specific phenotypes

Taxonomy:
Ebola virus
Project data type: Raw sequence reads
Scope:
Monoisolate
University of Liverpool
Accession:
PRJNA856238
ID:
856238

5.

Tracking Ebolavirus genomic drift with a resequencing microarray, verification with NGS

Project data type: Other
Scope:
Monoisolate
European Bioinformatics Institute
Accession:
PRJEB43115
ID:
743478

6.

EBOV Guinea 2021 genomes

Resurgence of Ebola virus in Guinea after 5 years: A new paradigm for thinking about Ebola Virus Disease

Project data type: Other
Scope:
Monoisolate
Centre de Recherche et de Formation en Infectiologie de Guinee
Accession:
PRJEB43650
ID:
724447

7.

Characterization of short leader and trailer RNAs synthesized by the EBOV RNA polymerase

Project data type: Raw sequence reads
Scope:
Multispecies
Philipps-Universitat Marburg
Accession:
PRJNA713937
ID:
713937

8.

Zaire ebolavirus

Zaire ebolavirus Transcriptome or Gene expression

Taxonomy:
Zaire ebolavirus
Project data type: Transcriptome or Gene expression
Scope:
Monoisolate
Scripps Research
Accession:
PRJNA665696
ID:
665696

9.

Remdesivir targets a structurally analogous region of the Ebola virus and SARS-CoV-2 polymerases

Project data type: Raw sequence reads
Scope:
Multispecies
US Centers for Disease Control and Prevention
Accession:
PRJNA664887
ID:
664887

10.

SPECIES-SPECIFIC ADAPTATION OF EBOLA VIRUS DURING REPLICATION IN HUMAN AND BAT CELLS

Project data type: Raw sequence reads
Scope:
Multispecies
UCSF
Accession:
PRJNA597079
ID:
597079

11.

NGSAP-VC : Genomic Variant Calling as an Installable GALAXY workflow Using NGS data.

Project data type: Raw sequence reads
Scope:
Multispecies
Jawaharlal Nehru University, New Delhi, India
Accession:
PRJNA590866
ID:
590866

12.

Different RNA Virus species

Metagenomic sequencing with spiked primer enrichment (MSSPE)

Project data type: Raw sequence reads
Scope:
Multispecies
NIH
Accession:
PRJNA578816
ID:
578816

13.

Implementation of Genomic Variant Calling Using GATK4, SPARK, WDL, CROMWELL and DOCKER Over Simulated Ebola NGS Dataset.

Project data type: Raw sequence reads
Scope:
Multispecies
Jawaharlal Nehru University, New Delhi, India
Accession:
PRJNA564500
ID:
564500

14.

Implementation of Genomic Variant Calling Using GATK4, SPARK, WDL, CROMWELL and DOCKER Over Simulated Ebola NGS Dataset.

Project data type: Raw sequence reads
Scope:
Multispecies
Jawaharlal Nehru University, New Delhi, India
Accession:
PRJNA564447
ID:
564447

15.

Implementation of Genomic Variant Calling Using GATK4, SPARK, WDL, CROMWELL and DOCKER Over Simulated Ebola NGS Dataset.

Project data type: Raw sequence reads
Scope:
Multispecies
Jawaharlal Nehru University, New Delhi, India
Accession:
PRJNA564445
ID:
564445

16.

New Ebola virus strain isolated from the 2017 Likati outbreak in DRC, using MinION-Oxford Nanopore Technologies.

Project data type: Raw sequence reads
Scope:
Multispecies
KU Leuven
Accession:
PRJNA539826
ID:
539826

17.

New Ebola virus strain isolated from the 2017 Likati outbreak in DRC.

New Ebola virus strain isolated from the 2017 Likati outbreak in the Democratic Republic of the Congo (DRC), using MinION-Oxford Nanopore Technologies.

Project data type: Other
Scope:
Monoisolate
KU LEUVEN - UNIVERSITY OF LEUVEN
Accession:
PRJEB32102
ID:
532370

18.

Zaire ebolavirus

Zaire ebolavirus Genome sequencing and assembly

Taxonomy:
Zaire ebolavirus
Project data type: Genome sequencing and assembly
Scope:
Monoisolate
U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID)
Accession:
PRJNA524316
ID:
524316

19.

Ebola virus produces discrete small non-coding RNAs independent of the host microRNA pathway and which lack rna interference activity in bat and human cells

Project data type: Raw sequence reads
Scope:
Multispecies
University of Texas Medical Branch
Accession:
PRJNA508298
ID:
508298

20.

Zaire ebolavirus

Zaire ebolavirus Genome sequencing

Taxonomy:
Zaire ebolavirus
Project data type: Genome sequencing
Scope:
Multiisolate
U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID)
Accession:
PRJNA494159
ID:
494159

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