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Items: 1 to 20 of 49

1.

The blood transcriptomes of cave and surface Astyanax morphs reveal diverse mechanisms for adaptation to reduced oxygen

Project data type: Raw sequence reads
Scope:
Multispecies
University of Cincinnati
Accession:
PRJNA1079358
ID:
1079358

2.

Starvation resistant cavefish reveal conserved mechanisms of starvation-induced hepatic lipotoxicity

Organism:
Astyanax mexicanus
Taxonomy:
Astyanax mexicanus (Mexican tetra)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Regeneration and Stress Biology, IRIBHM, ULB
Accession:
PRJNA1023959
ID:
1023959

3.

Evolution of the Mexican cavefish gut microbiome

Project data type: Raw sequence reads
Scope:
Multispecies
University of Nevada, Reno
Accession:
PRJNA994970
ID:
994970

4.

Transcriptomic profile of 3D spheroids developed from Astyanax Liver-derived cells - SFL and CFL.

Organism:
Astyanax mexicanus
Taxonomy:
Astyanax mexicanus (Mexican tetra)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Stowers Institute for Medical Research
Accession:
PRJNA980547
ID:
980547

5.

Astyanax mexicanus

Astyanax mexicanus Eye Transcriptome

Taxonomy:
Astyanax mexicanus (Mexican tetra)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Laboratory of Ecological and Evolutionary Genetics
Accession:
PRJNA938923
ID:
938923

6.

Cavefish Mount a Rapid and Sustained Regenerative Response Following Skeletal Muscle Injury

Organism:
Astyanax mexicanus
Taxonomy:
Astyanax mexicanus (Mexican tetra)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Stowers Institute for Medical Research
Accession:
PRJNA926982
ID:
926982

7.

Evolutionary history of Astyanax

Project data type: Raw sequence reads
Scope:
Multispecies
Universidad Nacional Autonoma de Mexico
Accession:
PRJNA899818
ID:
899818

8.

Astyanax Mexicanus Whole Chromosome 1 Sequencing

Project data type: Raw sequence reads
Scope:
Multispecies
Universidade Estadual Paulista Julio de Mesquita Filho
Accession:
PRJNA889936
ID:
889936

9.

Whole genome sequencing of Astyanax mexicanus Pachon

Project data type: Raw sequence reads
Scope:
Multispecies
University of Missouri
Accession:
PRJNA860039
ID:
860039

10.

Astyanax mexicanus isolate:ESR-SI-001

Astyanax mexicanus isolate:ESR-SI-001 RefSeq Genome sequencing

Organism:
Astyanax mexicanus
Taxonomy:
Astyanax mexicanus (Mexican tetra)
Project data type: RefSeq Genome sequencing
Scope:
Monoisolate
NCBI
Accession:
PRJNA853366
ID:
853366

11.

Transcriptomics analysis of cave, surface and hybrid 10 hpf embryos of the Mexican tetra Astyanax mexicanus

Project data type: Raw sequence reads
Scope:
Multispecies
UMR9197 - Institut des Neurosciences Paris-Saclay
Accession:
PRJNA848099
ID:
848099

12.

Astyanax mexicanus isolate:ESR-SI-002

Astyanax mexicanus isolate:ESR-SI-002 Genome sequencing and assembly

Organism:
Astyanax mexicanus
Taxonomy:
Astyanax mexicanus (Mexican tetra)
Project data type: Genome sequencing and assembly
Scope:
Monoisolate
University of Missouri
Accession:
PRJNA819399
ID:
819399

13.

Astyanax mexicanus isolate:ESR-SI-003

Astyanax mexicanus isolate:ESR-SI-003 Genome sequencing and assembly

Organism:
Astyanax mexicanus
Taxonomy:
Astyanax mexicanus (Mexican tetra)
Project data type: Genome sequencing and assembly
Scope:
Monoisolate
University of Missouri
Accession:
PRJNA819394
ID:
819394

14.

Astyanax mexicanus isolate:ESR-SI-001

Astyanax mexicanus Surface Genome sequencing

Organism:
Astyanax mexicanus
Taxonomy:
Astyanax mexicanus (Mexican tetra)
Project data type: Genome sequencing and assembly
Scope:
Monoisolate
University of Missouri
Accession:
PRJNA807270
ID:
807270

15.

Metabolic reprogramming underlies cavefish muscular endurance despite selective loss of muscle mass and contractility

Organism:
Astyanax mexicanus
Taxonomy:
Astyanax mexicanus (Mexican tetra)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Stowers Institute for Medical Research
Accession:
PRJNA805267
ID:
805267

16.

Liver-derived cell lines from cavefish Astyanax mexicanus as an in vitro model for studying metabolic adaptation

Organism:
Astyanax mexicanus
Taxonomy:
Astyanax mexicanus (Mexican tetra)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Stowers Institute for Medical Research
Accession:
PRJNA802717
ID:
802717

17.

Discordant genome assemblies drastically alter the interpretation of single cell RNA sequencing data which can be mitigated by a novel integration method

Organism:
Astyanax mexicanus
Taxonomy:
Astyanax mexicanus (Mexican tetra)
Project data type: Transcriptome or Gene expression
Scope:
Monoisolate
Department of Physiology, Anatomy and Genetics, University of Oxford
Accession:
PRJNA799038
ID:
799038

18.

Gene family evolution underlies cell type diversification in the hypothalamus of teleosts

Project data type: Raw sequence reads
Scope:
Multispecies
University Of Basel
Accession:
PRJNA754013
ID:
754013

19.

Astyanax mexicanus

Pachon cavefish Astyanax mexicanus genome sequencing and assembly

Taxonomy:
Astyanax mexicanus (Mexican tetra)
Project data type: Genome sequencing and assembly
Scope:
Monoisolate
GenoFish
Accession:
PRJNA734455
ID:
734455

20.

Enhanced lipogenesis through PparĪ³ helps cavefish adapt to food scarcity

Organism:
Astyanax mexicanus
Taxonomy:
Astyanax mexicanus (Mexican tetra)
Project data type: Other
Scope:
Multiisolate
Computational Biology, Stowers Institute for Medical Research
Accession:
PRJNA725832
ID:
725832

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