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Ciliate transcriptome CT_03

Identifiers
BioSample: SAMEA7538054; SRA: ERS5294511
Organism
uncultured Plagiopylea
cellular organisms; Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata; Plagiopylea; environmental samples
Attributes
collection date2020-08-25
broad-scale environmental contextfreshwater lake biome [ENVO:01000252]
local-scale environmental contextmicrobial feature [ENVO:01000007]
environmental mediumfresh water [ENVO:00002011]
environmental packagewater
geographic locationSwitzerland
investigation typeeukaryote
project nameMetagenomic and metatranscriptomic sequencing of water from the anoxic hypolimnion of a freshwater lake
descriptionSingle ciliate, Lake Zug water column (185m), February 2020
sample name33224:fb35f7cb-bfd7-4aef-8ed9-8ae5b318335b
ENA-CHECKLISTERC000024
ENA-FIRST-PUBLIC2020-11-10T04:11:20Z
ENA-LAST-UPDATE2020-11-06T16:03:28Z
External IdSAMEA7538054
INSDC center nameMax Planck Institute for Marine Microbiology
INSDC first public2020-11-10T04:11:20Z
INSDC last update2020-11-06T16:03:28Z
INSDC statuspublic
Submitter Id33224:fb35f7cb-bfd7-4aef-8ed9-8ae5b318335b
broker nameGFBIO
geographic location (depth)185
geographic location (latitude)47.0925
geographic location (longitude)8.4891
library_selection_additional_informationMixture of random priming and oligo-dT
scientific_nameuncultured Plagiopylea
sequencing methodIllumina HiSeq 3000
submitted to INSDCtrue
water environmental packagewater
Description

Single ciliate, Lake Zug water column (185m), February 2020

BioProject
PRJEB36502
Retrieve all samples from this project

Submission
EBI; 2020-11-11
Accession:
SAMEA7538054
ID:
16766161

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