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Candidatus Peribacteria bacterium

Identifiers
BioSample: SAMEA14306425; SRA: ERS11897742
Organism
Candidatus Peribacteria bacterium
cellular organisms; Bacteria; Bacteria incertae sedis; Bacteria candidate phyla; Candidatus Peregrinibacteria; Candidatus Peribacteria; unclassified Candidatus Peribacteria
Attributes
collection date2019-04-09
broad-scale environmental contextfreshwater lake
local-scale environmental contextlake
environmental mediumfresh water
geographic locationItaly
investigation typemetagenome-assembled genome
isolation sourceFreshwater lake
project namePRJEB35640
sample nameMaH-09apr19-187
ENA-CHECKLISTERC000047
ENA-FIRST-PUBLIC2022-06-30
ENA-LAST-UPDATE2022-06-30
External IdSAMEA14306425
INSDC center aliasBIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO
INSDC center nameBIOLOGY CENTRE ASCR, V.V.I., INSTITUTE OF HYDROBIO
INSDC first public2022-06-30T00:19:14Z
INSDC last update2022-06-30T00:19:14Z
INSDC statuspublic
Submitter IdMaH-09apr19-187
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwareMEGAHIT; kmer set 29,49,69,89,109,119,129,149
binning parameterscoverage and kmer
binning softwareMetaBAT2
completeness score57.57
completeness softwarecheckm
contamination score0.93
geographic location (latitude)48.6
geographic location (longitude)14.666667
metagenomic sourcefreshwater metagenome
sample derived fromERS4065069
sequencing methodIllumina NovaSeq 6000
taxonomic identity markermulti-marker approach
Description

Patescibacteria assembled from Lake Maggiore

BioProject
PRJEB35640 Freshwater metagenomes from different European and Asian lakes
Retrieve all samples from this project

Submission
EBI; 2022-07-01
Accession:
SAMEA14306425
ID:
29454850

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