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Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Identifiers
BioSample: SAMEA7321136; Sample name: 53417; SRA: ERS5079672
Organism
Isoodon obesulus (southern brown bandicoot)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Peramelemorphia; Peramelidae; Isoodon
Attributes
investigation typephylogenetic study
geographic locationAustralia
tissueunknown
sub speciesmount lofty ranges
identified byunknown
sexnot determined
bioproject_accessionPRJEB39788
sequencing methodIllumina SBS, short PE reads
geographic location (region and locality)South Australia
BPA_sample_ID40710
BPA_library_ID53417
voucher_numberno voucher
tissue_numberN524
voucher_or_tissue_numberN524
institution_nameSouth Australian Museum
collectionunknown
tissue_preservationunknown
phylumChordata
classMammalia
orderPeramelemorphia
familyPeramelidae
genusIsoodon
speciesobesulus
wild_captiveunknown
state_or_regionSouth Australia
location_textMount Lofty Range
decimal_latitude-35.4
decimal_longitude138.53
DNA_extraction_methodunknown
TCCP_ID53417_AHGVYGBCX2_CCAACCT_S79
depthmean134.08
depthmedian86
totalreadsstart7788664
totalmapped2tgt0.3163
totalpaired0.2843
CALLABLE1463988
NO_COVERAGE48
LOW_COVERAGE145125
ReadLength100bp
AtlasLivingAustraliahttps://biocache.ala.org.au/occurrences/8fa005e7-9f3f-4305-af4e-772b2e633f40
ENA-FIRST-PUBLIC2021-01-05
ENA-LAST-UPDATE2020-09-25
BioProject
PRJEB39788 Australian marsupial phylogeny
Retrieve all samples from this project

Submission
EBI; 2021-01-06
Accession:
SAMEA7321136
ID:
17239593

BioProject Nucleotide

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