Australian marsupial phylogenetic study. Bioplatfo... - BioSample

Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Organism: Sminthopsis griseoventer (gray-bellied dunnart)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Sminthopsis

Attributes

geographic location	Australia
identified by	Catherine Kemper \| Medlin
investigation type	phylogenetic study
sample name	55358
sex	not determined
tissue	liver
AtlasLivingAustralia	https://biocache.ala.org.au/occurrences/0eebae8b-e78b-4dbb-a477-019c490df1cc
BPA_library_ID	55358
BPA_sample_ID	41947
CALLABLE	1241696
DNA extraction method	salting out
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2021-01-05T04:27:29Z
ENA-LAST-UPDATE	2020-09-25T00:43:16Z
External Id	SAMEA7321338
INSDC center name	AUSTRALIAN NATIONAL UNIVERSITY
INSDC first public	2021-01-05T04:27:29Z
INSDC last update	2020-09-25T00:43:16Z
INSDC status	public
LOW_COVERAGE	131648
NO_COVERAGE	877
ReadLength	150bp
Submitter Id	55358
TCCP_ID	55358_HWWJFAFXY_ACGCAAC_S21
bioproject_accession	PRJEB39788
class	Mammalia
collection	Mammal
common name	gray-bellied dunnart
decimal_latitude	-33.91
decimal_longitude	136.13
depthmean	93.7
depthmedian	59
family	Dasyuridae
genus	Sminthopsis
geographic location (region and locality)	South Australia
institution_name	Australian Biological Tissue Collection, South Australian Museum
location_text	7.6km SSE, Verran Hill, Hincks Conservation Park, Eyre Peninsula
order	Dasyuromorphia
phylum	Chordata
scientific_name	Sminthopsis griseoventer
sequencing method	Illumina SBS, short PE reads
species	griseoventer
state_or_region	South Australia
tissue_number	ABTC80004
tissue_preservation	ethanol \| frozen
totalmapped2tgt	0.7752
totalpaired	0.759
totalreadsstart	1376684
voucher_number	SAMA M22447
voucher_or_tissue_number	SAMA M22447

BioProject: PRJEB39788 Australian marsupial phylogeny
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