Pathogen: clinical or host-associated sample from ... - BioSample - NCBI

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Pathogen: clinical or host-associated sample from Shigella sonnei

Identifiers: BioSample: SAMN36892876; Sample name: BWH_1402_S_son; SRA: SRS18550481

Organism: Shigella sonnei
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella

Package: Pathogen: clinical or host-associated; version 1.0

Attributes

isolate	BWH_1402_S_son
collected by	Brigham and Women's Hospital
collection date	2023
geographic location	USA:Boston
host	Homo sapiens
host disease	GI tract infection
isolation source	stool
latitude and longitude	42.3362 N 71.1067 W
host age	56

BioProject: PRJNA278886
Retrieve all samples from this project

Submission: Brigham and Women's Hospital, Jay Worley; 2023-08-08

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
ampicillin	susceptible	<=	2	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
ceftriaxone	susceptible	<=	1	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI
trimethoprim-sulfamethoxazole	resistant	>=	16/304	mg/L	MIC	Vitek	Biomérieux	96-Well Plate	CLSI

Accession:: SAMN36892876
ID:: 36892876

BioProject SRA Nucleotide

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Pathogen: clinical or host-associated sample from Shigella sonnei
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