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Animal sample from Strigops habroptilus

Identifiers
BioSample: SAMN09948751; Sample name: Kakapo tissue for G10K-VGP reference genome; SRA: SRS18622706
Organism
Strigops habroptila (Kakapo)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Sauropsida; Sauria; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Strigops
Package
Model organism or animal; version 1.0
Attributes
isolateJane
ageAdult
sexfemale
tissueblood in lysis buffer or EtOH
biomaterial providerDepartment of Conservation, New Zealand
birth date1981
birth locationNew Zealand: Anchor Island
collected byTim Raemaekers, Daryl Eason, Andrew Digby of Department of Conservation, New Zealand
collection date2013-04-13
death date2018-05-17
diseaseArthritis of left hock joint since at least April 2000
disease stageMedium
geographic locationNew Zealand: Anchor Island
latitude and longitude45.757406 S 166.504927 E
storage conditionsfrozen
treatmentOther collection dates in EtOH were in 2016 and 2017
Led tissue collectionJason Howard
Help managed collectionBruce Robertson
Maoriapproval
Description

The data from this BioSample are currently under a G10K-VGP publication embargo until removed from this description, following the G10K data use policy at the following URL: https://genome10k.soe.ucsc.edu/about/data_use_policy. The Kakapo parrot is one of the most critically endangered birds, with 148 animals left as of the date of this submission. It is Native to New Zealand. This sample from a female named Jane has been collected as part of the G10K-VGP Project, avian B10K Project, and the Kakapo Genetic Recovery Project. Her blood sample was collected while she as alive in the wild on Anchor Island, New Zealand, in 2013, 2016, and 2017 by Tim Raemaekers, Daryl Eason, and Andrew Digby, in collaboration with the Department of Conservation, New Zealand. The samples were prepared by Jason Howard in the lab of Erich Jarvis. Jason was responsible for bringing a group of people together to have the Kakapo genome sequenced.

BioProjects
PRJNA1005977
Retrieve all samples from this project

PRJNA558775 Strigops habroptila isolate:Jane
Retrieve all samples from this project

PRJNA489135 Strigops habroptila isolate:Jane
Retrieve all samples from this project

PRJNA489134 Strigops habroptila isolate:Jane
Retrieve all samples from this project

Submission
G10K, Erich Jarvis; 2018-09-03
Accession:
SAMN09948751
ID:
9948751

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