MAG T8_bin-157 from assembly ERS4649306

Identifiers: BioSample: SAMEA6955945; SRA: ERS4665815

Organism: uncultured beta proteobacterium
cellular organisms; Bacteria; Pseudomonadota; Betaproteobacteria; environmental samples

Attributes

ammonium	2.05111148068075
collection date	2017-07-17
dissolved organic carbon	3188.82329922486
broad-scale environmental context	lentic water body
local-scale environmental context	pond
environmental medium	water
geographic location	USA
investigation type	metagenome
isolation source	lake water
nitrate	1.7901810985906
nitrite	0
nitrogen	130.758851121249
oxygen	8.01
pH	4.97
phosphate	0.189530742939453
project name	microbes in stratified freshwaters
sample name	T8_bin-157
temperature	21.9
total phosphorus	0.001355986399069
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2020-06-15T17:03:32Z
ENA-LAST-UPDATE	2020-06-18T09:08:18Z
External Id	SAMEA6955945
INSDC center name	BILS
INSDC first public	2020-06-15T17:03:32Z
INSDC last update	2020-06-18T09:08:18Z
INSDC status	public
Submitter Id	T8_bin-157
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	megahit
binning parameters	min_len:1500,min_bin_size:10000,maxP:93,minS:50
binning software	metabat
collection data	metagenome
completeness score	71.72
completeness software	checkm
conductivity.	0.0182
contamination score	0.86
ferric iron	21.3109
ferrous iron	54.6
geographic location (depth)	0
geographic location (latitude)	68.63333333333334
geographic location (longitude)	-149.6
gtdb_taxonomy	d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Polynucleobacter;s__Polynucleobacter asymbioticus
iron	75.8
metagenomic OTU	anoxic_mOTU_0695
metagenomic source	lake water metagenome
region	Toolik/Alaska
sample derived from	ERS4649306
sample owner	Mariana Kluge
scientific_name	uncultured beta proteobacterium
sequencing method	NovaSeq
site name	Toolik
taxonomic identity marker	gtdbtk followed by sourmash-lca, see publication
water environmental package	water

BioProject: PRJEB38681
Retrieve all samples from this project

Submission: EBI; 2020-06-16

Accession:: SAMEA6955945
ID:: 15266917

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MAG T8_bin-157 from assembly ERS4649306

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