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Assembly for Alistipes_sp_nov_DSM112343

Identifiers
BioSample: SAMEA14418518; SRA: ERS12024080
Organism
Alistipes muris
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes
Attributes
collection date2018-11-20
broad-scale environmental contextmouse gastrointestinal tract
local-scale environmental contextmouse intestine
environmental mediumgut content
geographic locationGermany
host taxonomy ID10090 (10090)
investigation typesingle amplified genome
project nameEnriched cultured diversity of the mouse gut microbiota for custom-made synthetic communities
sample nameAlistipes_sp_nov_DSM112343
ENA first public2022-05-20
ENA last update2022-05-20
ENA-CHECKLISTERC000013
External IdSAMEA14418518
INSDC center aliasRWTH Aachen University Hospital
INSDC center nameRWTH Aachen University Hospital
INSDC first public2022-05-20T16:20:31Z
INSDC last update2022-05-20T16:20:31Z
INSDC statuspublic
Submitter IdAlistipes_sp_nov_DSM112343
geographic location (latitude)50.776389
geographic location (longitude)6.043611
host-associated environmental packagehost-associated
sequencing methodIllumina NextSeq500
Description

Genome of pure isolate Alistipes_sp_nov_DSM112343 cultured from mouse cecal content

BioProject
PRJEB50452 Expanding the mouse intestinal bacterial collection (miBC)
Retrieve all samples from this project

Submission
EBI; 2022-05-21
Accession:
SAMEA14418518
ID:
28576243

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