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Genomic DNA was extracted from two aEPEC O177 isolates (CF-154-A and CF-334-B) obtained from the Department of Microbiology, at NWU. The gDNA was sequenced using Illumina MiSeq platform. After sequencing FASTQ files were obtained. Raw reads were cleaned and assembled into contigs using FASTQC (v.0.11.5) SPAdes (v3.13.0), respectively. The genome annotation was carried out using PGAP, v.2.0 and RAST (v.2.0). The genome maps were drafted using PATRIC (v.3.6.2).
BioProject SRA Nucleotide
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