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Pathogen: clinical or host-associated sample from Yersinia pestis

Identifiers
BioSample: SAMN40940154; Sample name: YP_133; SRA: SRS21001250
Organism
Yersinia pestis
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex
Package
Pathogen: clinical or host-associated; version 1.0
Attributes
strain133
isolatemissing
collected byCenter for Quarantine and Particularly Dangerous Infections of the Ministry of Health of the Kyrgyz Republic and Russian Re-search Anti-Plague Institute "Microbe"
collection date2023
geographic locationKyrgyzstan: Sarydzhaz high-mountain plague focus, Chon-Karabel area
hostMarmota baibacina
host diseaseplague
isolation sourcemissing
latitude and longitudemissing
culture collectionmissing
genotype0.ANT5
host agemissing
host descriptionmissing
host disease outcomemissing
host disease stagemissing
host health statemissing
host sexmissing
host subject idmissing
host tissue sampledmissing
passage historymissing
pathotypemissing
serotypemissing
serovarmissing
specimen vouchermissing
subgroupmissing
subtypemissing
Description

Whole-genome sequences of Yersinia pestis strain 133

BioProject
PRJNA1098581
Retrieve all samples from this project

Submission
Russian Research Anti-Plague Institute "Microbe", Alina Balykova; 2024-04-12
Accession:
SAMN40940154
ID:
40940154

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