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Animal sample from Struthio camelus (North African ostrich) for VGP reference genome, bStrCam1

Identifiers
BioSample: SAMN42123890; Sample name: Animal sample from Struthio camelus (North African ostrich) for VGP reference genome, bStrCam1; SRA: SRS22089914
Organism
Struthio camelus x Struthio molybdophanes
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Sauropsida; Sauria; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Struthioniformes; Struthionidae; Struthio
Package
Model organism or animal; version 1.0
Attributes
isolatebStrCam1
development stageembryo
collection date2022-09-29
geographic locationUSA: New York, NY
sexfemale
tissueembryonic fibroblast cells
biomaterial providerThe Rockefeller University
collected byAnna Keyte, Matthew Biegler
latitude and longitude40.750519 N 73.967474 W
storage conditions-80oC
treatmentfrozen in 90:10 FBS:DMSO
Description

The common ostrich (Struthio camelus), or simply ostrich, is a species of flightless bird native to certain large areas of Africa. It is one of two extant species of ostriches, the only living members of the genus Struthio in the ratite order of birds. The North African ostrich (Struthio camelus camelus) is the nominate subspecies of the common ostrich from West and North Africa. It has the largest average size among the subspecies of ostriches, making it the largest living bird (from Wikipedia entries). The cells of this sample are embryonic fibroblasts derived from an HH28 embryo cultured up to 14 days in vitro. The embryo came from eggs shipped from Roaming Acres farm in Lafayette Township, New Jersey. The farm raises ostriches that are a non-pedigreed hybrid of the "blue-necked" Somali ostrich (Struthio molybdophanes) and the "red-necked" North African sub-species of the common ostrich (Struthio camelus camelus). The sample was procured by Anna Keyte and Matthew Biegler to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP), and the cells were incubated at the Rockefeller University. Sequencing and genome assembly were conducted at the Vertebrate Genome Lab (VGL) at the Rockefeller University, led by Erich D. Jarvis, Giulio Formenti, and Jennifer Balacco.

BioProjects
PRJNA1139187
Retrieve all samples from this project

PRJNA1129092 Struthio camelus isolate:bStrCam1
Retrieve all samples from this project

PRJNA1129091 Struthio camelus isolate:bStrCam1
Retrieve all samples from this project

Submission
G10K, Erich Jarvis; 2024-06-27
Accession:
SAMN42123890
ID:
42123890

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