DNA extracted from Ectocarpus species 12 strain Ec... - BioSample

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Organism: Ectocarpus sp. 12 AP-2014
cellular organisms; Eukaryota; Sar; Stramenopiles; Ochrophyta; PX clade; Phaeophyceae; Ectocarpales; Ectocarpaceae; Ectocarpus; unclassified Ectocarpus

Attributes

collected by	Dieter Muller
collection date	missing: data agreement established pre-2023
culture collection	RCC7106
geographic location	Chile
ploidy	diploid
description	DNA extracted from Ectocarpus species 12 strain Ec fas CH92 Nie 2f for genome sequencing.
sample name	20Ec-1-A
sex	female
strain	Ec fas CH92 Nie 2f
tissue	whole thallus
Culture conditions	Three Petri dish cultures in Provasoli-enriched seawater plus antibiotics. Grown under 12:12h white light at 13C.
DNA or RNA extracted	DNA
DNA or RNA quality (ratio 260/280)	1,20
ENA first public	2024-01-10
ENA-CHECKLIST	ERC000043
Extraction date	02/02/16
Extraction method	Macherey-Nagel Nucleospin Plant II midi DNA extraction kit
Harvest date	18/11/15
INSDC center name	Genoscope CEA
INSDC status	public
Submitter Id	20Ec-1-A
additional details	Ec fas CH92 Nie 2f and Ec fas CH92 Nie 3m are sister and brother, derived from a heterozygous field sporophyte. Brother of strain Nie 2f. Sampled in March 1992.
generation	partheno-sporophyte
geographic location (latitude)	-39.8667
geographic location (longitude)	-73.3833
identification by	Dieter Muller
identification method	Morphology, genome sequenced
sample alias	20Ec-1-A
sampling ecosystem	coastal
sampling sea	Pacific Ocean
sampling site	Niebla, Valdivia, Chile
sampling water type	marine
scientific_name	Ectocarpus sp. 12 AP-2014
sequencing centre sample code	BSI_AG
sex determination method	genetic cross, genome sequencing

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PRJEB72149 Sequencing data of the Phaeoexplorer project
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