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Li-Fraumeni Syndrome

, MPH, , MS, LGC, , MD, , MS, CGC, and , MD, MPH.

Author Information and Affiliations

Initial Posting: ; Last Update: September 5, 2024.

Estimated reading time: 46 minutes

Summary

Clinical characteristics.

Li-Fraumeni syndrome (LFS) is a cancer predisposition syndrome associated with high risks for a broad spectrum of cancers including early-onset cancers. Five cancer types account for the majority of LFS tumors: adrenocortical carcinomas, breast cancer, central nervous system tumors, osteosarcomas, and soft-tissue sarcomas. Other cancers associated with LFS include leukemia, colorectal cancer, stomach cancer, lung cancer, melanoma, pediatric head and neck cancers, pancreatic cancer, and prostate cancer. Cancer survivors are at increased risk for developing additional primary cancers and treatment-related secondary cancers. The lifetime risks of cancer for women and men with classic LFS are 90% and 70%, respectively, and 50% of cancers occur prior to age 40 years.

Diagnosis/testing.

The clinical diagnosis of LFS can be established in a proband who meets clinical diagnostic criteria, or the molecular diagnosis is established in a proband with a germline pathogenic variant in TP53 identified by molecular genetic testing.

Management.

Treatment of manifestations: Bilateral mastectomy rather than lumpectomy is often recommended for LFS-related breast cancer to reduce the risk of a second primary breast cancer and to avoid radiation therapy. Radiation therapy should be avoided if possible with treatment of other cancers, to reduce the risk of secondary malignancies. Conventional cytotoxic chemotherapy may also pose an increased secondary cancer risk; however, treatment efficacy should be prioritized above concerns about late effects. Otherwise, standard oncologic management is recommended.

Prevention of primary manifestations: Risk-reducing bilateral mastectomy to reduce the risk for breast cancer is an option for women with LFS; colonoscopy may be considered as surveillance as well as primary prevention of colorectal cancer; dermatologic surveillance can be used to detect and remove premalignant lesions.

Surveillance: Comprehensive physical examination and ultrasound of abdomen and pelvis every three to four months from birth to age 18 years; comprehensive physical examination every six months in those older than age 18 years; annual whole-body MRI; females should have a clinical breast examination every six to 12 months beginning at age 20-25 years, annual breast MRI starting between age 20-30 years, and annual mammogram alternating with breast MRI from age 30 to 75 years; annual brain MRI; upper endoscopy and colonoscopy every two to five years beginning at age 25 years; annual dermatologic exam beginning at age 18 years; annual ultrasound of the abdomen and pelvis beginning at age 18 years; consider additional screening for lung, pancreatic, prostate, and thyroid cancer depending on family history and additional risk factors; assess social work and genetic counseling needs at each visit.

Agents/circumstances to avoid: Minimize exposure to diagnostic and therapeutic radiation; avoid known carcinogens including unprotected sun exposure, tobacco use, occupational exposures, and excessive alcohol use.

Evaluation of relatives at risk: If a molecular diagnosis of LFS has been established in the proband, offer TP53 molecular genetic testing to all first-degree relatives (including children) and other relatives in order to identify individuals with LFS who would benefit from increased cancer monitoring, with attention to symptoms or signs of cancer and early intervention when a cancer or precancer is identified. If a clinical diagnosis of LFS has been established in the proband but the proband does not have an identified TP53 pathogenic variant, all at-risk family members should be counseled regarding their potential increased risks for LFS-related cancers and options for surveillance and risk reduction.

Genetic counseling.

LFS is inherited in an autosomal dominant manner. Most individuals diagnosed with LFS inherited a TP53 pathogenic variant from a parent. Some individuals diagnosed with LFS have the disorder as the result of a de novo germline pathogenic variant. The frequency of de novo pathogenic variants is estimated at between 7% and 20%. Each child of an individual with a molecular diagnosis of LFS has a 50% risk of inheriting the TP53 pathogenic variant; each child of an individual with a clinical diagnosis of LFS (in whom a TP53 pathogenic variant has not been identified) is presumed to have an increased risk for LFS. If a TP53 pathogenic variant has been identified in an affected family member, predictive testing for at-risk family members and prenatal/preimplantation genetic testing are possible.

Diagnosis

Consensus clinical diagnostic criteria for Li-Fraumeni syndrome (LFS) have been published [Li & Fraumeni 1969].

Suggestive Findings

LFS should be suspected in probands who meet modified Chompret criteria or have any additional suggestive findings.

Modified Chompret criteria [Bougeard et al 2015]:

  • A proband with a tumor belonging to the classic LFS tumor spectrum (e.g., premenopausal breast cancer, soft-tissue sarcoma, osteosarcoma, central nervous system [CNS] tumor, adrenocortical carcinoma [ACC]) before age 46 years AND at least one first- or second-degree relative with a classic LFS tumor (except breast cancer if the proband has breast cancer) before age 56 years or with multiple tumors; OR
  • A proband with multiple tumors (except multiple breast tumors), two of which belong to the classic LFS tumor spectrum and the first of which occurred before age 46 years; OR
  • A proband with ACC, choroid plexus tumor, or rhabdomyosarcoma (embryonal anaplastic subtype), irrespective of family history; OR
  • A proband with breast cancer before age 31 years

Additional suggestive findings:

Establishing the Diagnosis

Clinical diagnosis. A clinical diagnosis of LFS can be established in a proband who meets ALL THREE classic LFS criteria [Li & Fraumeni 1969]:

Molecular diagnosis. The molecular diagnosis of LFS is established in a proband with a heterozygous germline pathogenic (or likely pathogenic) variant in TP53 identified by molecular genetic testing (see Table 1).

Note: (1) Per ACMG/AMP variant interpretation guidelines, the terms "pathogenic variant" and "likely pathogenic variant" are synonymous in a clinical setting, meaning that both are considered diagnostic and can be used for clinical decision making [Richards et al 2015]. Reference to "pathogenic variants" in this GeneReview is understood to include likely pathogenic variants. (2) Identification of a heterozygous TP53 variant of uncertain significance does not establish or rule out the diagnosis. (3) Identification of low-level mosaicism for a TP53 pathogenic variant in leukocytes is suggestive of a postzygotic (acquired) pathogenic variant. Variants at allele frequencies in the heterozygous range may also be acquired, and clinical evaluation should guide further testing to determine if a pathogenic variant is constitutional or somatic [Coffee et al 2020, Schwartz et al 2021, Castillo et al 2022] (see also www.nccn.org; subscription required).

Molecular genetic testing approaches can include single-gene testing or use of a multigene panel:

  • Single-gene testing. Molecular analysis of TP53 includes sequence analysis to detect missense, nonsense, and splice site variants and small intragenic deletions/insertions and gene-targeted deletion/duplication analysis.
    Note: Targeted testing for the TP53 p.Arg337His founder variant can be considered first in individuals of southern and southeastern Brazilian ancestry [Frebourg et al 2020].
  • A multigene panel that includes TP53 and other genes of interest (see Differential Diagnosis) may be considered to identify the genetic cause of the condition while limiting identification of variants of uncertain significance and pathogenic variants in genes that do not explain the underlying phenotype. Note: (1) The genes included in the panel and the diagnostic sensitivity of the testing used for each gene vary by laboratory and are likely to change over time. (2) Hereditary cancer multigene panels typically include genes not associated with the condition discussed in this GeneReview. (3) In some laboratories, panel options may include a custom laboratory-designed panel and/or custom phenotype-focused exome analysis that includes genes specified by the clinician. (4) Methods used in a panel may include sequence analysis, deletion/duplication analysis, and/or other non-sequencing-based tests.
    For an introduction to multigene panels click here. More detailed information for clinicians ordering genetic tests can be found here.

Table 1.

Molecular Genetic Testing Used in Li-Fraumeni Syndrome

Gene 1MethodProportion of Pathogenic Variants 2 Identified by Method
TP53 Sequence analysis 389% 4, 5
Gene-targeted deletion/duplication analysis 61% 7
Unknown 8NA
1.
2.

See Molecular Genetics for information on variants detected in this gene.

3.

Sequence analysis detects variants that are benign, likely benign, of uncertain significance, likely pathogenic, or pathogenic. Variants may include missense, nonsense, and splice site variants and small intragenic deletions/insertions; typically, exon or whole-gene deletions/duplications are not detected. For issues to consider in interpretation of sequence analysis results, click here.

4.
5.

Sequence analysis of the entire TP53 coding region (exons 2-11) detects about 95% of TP53 pathogenic variants, most of which are missense variants.

6.

Gene-targeted deletion/duplication analysis detects intragenic deletions or duplications. Methods used may include a range of techniques such as quantitative PCR, long-range PCR, multiplex ligation-dependent probe amplification (MLPA), and a gene-targeted microarray designed to detect single-exon deletions or duplications.

7.

LFS can be caused by a deletion involving the coding region of TP53 or the promoter and noncoding exon [Guha & Malkin 2017].

8.

To date, TP53 is the only gene known to be associated with LFS. However, a germline pathogenic variant is detected in only 90% of individuals who meet classic LFS criteria and 50% of individuals who meet modified Chompret criteria [Bougeard et al 2015, Guha & Malkin 2017].

Clinical Characteristics

Clinical Description

Li-Fraumeni syndrome (LFS) is associated with a high risk for a broad spectrum of cancers. The five core LFS-related cancers are adrenocortical carcinomas (ACC), breast cancer, central nervous system (CNS) tumors, osteosarcomas, and soft-tissue sarcomas [Evans & Woodward 2021]. The risk of any type of cancer by age 50 years in an international study of 4,028 individuals with LFS was 92.4% in women and 59.7% in men [Fortuno et al 2024]. In one study, the most frequent first cancer was breast cancer for women and CNS and soft-tissue sarcoma for men [de Andrade et al 2021]. The most frequent cancers by age group include the following [Amadou et al 2018, Shin et al 2020]:

  • Childhood (age 0-15 years): ACC, choroid plexus carcinoma, rhabdomyosarcoma, and medulloblastoma
  • Adolescent to adulthood (16-50 years): breast cancer, osteosarcoma, soft-tissue sarcoma, leukemia, astrocytoma, glioblastoma, colorectal cancer, and lung cancer
  • Late adulthood (51-80 years): pancreatic cancer and prostate cancer

ACC develops in 6%-13% of individuals with LFS most often as a pediatric cancer [Bougeard et al 2015]. ACC can also occur in adulthood, typically before age 40 years [Mai et al 2016]. The southern Brazilian TP53 founder variant p.Arg337His is associated with a very high risk of pediatric ACC. In one series of individuals with TP53 pathogenic variant p.Arg337His, ACC accounted for 55% of childhood cancers and 23% of adult-onset cancers [Ferreira et al 2019].

Breast cancer risk for females with LFS is 80%-90%, which is higher than the lifetime risk associated with BRCA1- and BRCA2-related hereditary breast cancer [Mai et al 2016, Blondeaux et al 2023]. Breast cancer risk is based on assigned sex at birth but may also be influenced by gender-affirming treatment. LFS-related breast cancers occur at a younger age, with almost all breast cancers in women with LFS occurring prior to menopause [Bougeard et al 2015]. LFS-related breast cancers are more likely to be ductal, estrogen receptor and progesterone receptor positive, and show human epidermal growth factor receptor 2 (HER2) amplification [Melhem-Bertrandt et al 2012, Kuba et al 2021, Sandoval et al 2022]. Studies have indicated significantly higher rates of ipsilateral breast cancer with breast-conserving surgery, higher rates of contralateral breast cancer, and lower rates of relapse-free survival in individuals with LFS-related breast cancer compared to other individuals with breast cancer [Hyder et al 2020, Sheng et al 2020, Evans & Woodward 2021, Guo et al 2022]. Men with LFS do not appear to have an increased risk of breast cancer, though male breast cancer has been reported [Mai et al 2016, Shin et al 2020]. In women, malignant phyllodes breast tumors are associated with LFS [Villani et al 2016].

CNS tumors account for 9%-14% of LFS cancers [Bougeard et al 2015]. In one series, the cumulative incidence of CNS tumors by age 70 years was 6% for women and 19% for men [Mai et al 2016]. The age of onset of CNS tumors is biphasic with both childhood and adult onset, often before age 40 years (median age: 16 years) [Valdez et al 2017]. Glioblastomas and astrocytomas are the most common CNS tumor types in individuals with LFS, although many other CNS tumor types have been reported, including ependymomas, choroid plexus carcinomas, supratentorial primitive neuroectodermal tumors, and medulloblastomas [Bougeard et al 2015, Valdez et al 2017]. LFS-related medulloblastomas are more likely to be of the sonic hedgehog-activated subtypes [Waszak et al 2018].

Osteosarcomas account for up to 16% of LFS cancers. Occurrence of osteosarcoma is highest in childhood and adolescence; however, osteosarcoma diagnosis in adulthood is also reported [Bougeard et al 2015]. In one series, the cumulative incidence of bone cancers by age 70 years was 5% for women and 11% for men [Mai et al 2016].

Soft-tissue sarcomas, especially rhabdomyosarcoma, are the most common LFS cancers in children and account for 17%-27% of the total cancers occurring in individuals with LFS [Bougeard et al 2015]. In one series, the cumulative incidence of soft-tissue sarcoma was 15% for women and 22% for men [Mai et al 2016]. The highest risk of rhabdomyosarcoma is between ages 0-15 years; however, rhabdomyosarcoma can also occur at older ages.

Leukemia occurs in about 4% of individuals with LFS [Bougeard et al 2015]. The risk of leukemia seems highest from ages 0 to 15 years but can occur at any age. Low-hypodiploid acute lymphoblastic leukemia (ALL), in which leukemic blasts have 32-39 chromosomes, is the most common hematologic malignancy in individuals with LFS; B-cell ALL is also common [Qian et al 2018, Swaminathan et al 2019, Winter et al 2021]. Other forms of leukemia include acute myeloid leukemia (AML) and myelodysplastic syndrome (MDS), which can occur as primary cancers or secondary treatment-related cancers. Adults may also develop treatment-related chronic myeloid leukemia (CML). There is an increased risk of therapy-related leukemia and MDS with the use of cytotoxic agents and/or radiation therapy. Individuals with LFS-related leukemia may have shorter clinical responses and poorer outcomes compared to other individuals with leukemia [Swaminathan et al 2019].

Gastrointestinal (GI) cancers account for about 5.1% of malignancies in individuals with LFS; 2.8% of individuals have colorectal cancer and 1.3% have esophageal or gastric cancer [Hatton et al 2024]. Gastroesophageal junction (GEJ) cancer has also been reported in individuals with LFS [Tjandra & Boussioutas 2024]. GI cancers in individuals with LFS tend to occur at a younger age than in those without LFS [Yurgelun et al 2015, Rengifo-Cam et al 2018, Hatton et al 2024]. The risk of LFS-related gastric cancer is higher in individuals of Japanese and other Asian ancestry, likely due to dietary risk factors and higher incidence of H pylori infection [Ariffin et al 2015, Funato et al 2021]. There also appears to be an increased risk of pancreatic cancer in individuals with LFS [Amadou et al 2018].

Other cancers. Individuals with LFS are reported to have an increased risk of early-onset lung cancer, often with increased frequency of somatic EGFR pathogenic variants [Benusiglio et al 2021, Kerrigan et al 2021]. An increased risk of melanoma [Hatton et al 2022, Sandru et al 2022], lymphoma [Bougeard et al 2015], and prostate cancer have been reported [Maxwell et al 2022] There may also be an increased risk of kidney, larynx, non-melanoma skin, ovary, testis, and thyroid cancer [Mai et al 2016, Valdez et al 2017].

Gestational choriocarcinoma. Gestational choriocarcinoma or other gestational trophoblastic disease has been reported in women with LFS and in women (without LFS) carrying a fetus with a paternally inherited TP53 pathogenic variant [Brehin et al 2018, Cotter et al 2018].

Excess of early-onset cancers. In one series, the average onset of first cancer for men with LFS was age 17 years; the average onset of first cancer for women was age 28 years when including breast cancer and age 13 years when excluding breast cancer [Bougeard et al 2015]. In another series, it was estimated that 50% of LFS-related cancers occurred by age 30-31 years in women and age 46 in men [Mai et al 2016].

Excess of multiple primary cancers. Individuals with LFS have up to 50% risk of developing a second cancer (median onset: 10 years after the first cancer diagnosis). Radiation and chemotherapy treatment of an LFS-related cancer may increase the risk of a second malignancy [Mai et al 2016, Schon & Tischkowitz 2018, Swaminathan et al 2019].

Prognosis. In one study, LFS-related breast cancer was associated with lower rates of recurrence-free survival and overall survival compared to other individuals with breast cancer [Sheng et al 2020]. There may also be poorer outcomes in LFS-related leukemia compared to leukemia in other individuals [Swaminathan et al 2019].

Genotype-Phenotype Correlations

There continues to be debate regarding genotype-phenotype correlations in LFS.

Nonsense, frameshift, and missense pathogenic variants that cause complete loss of p53 function or a dominant-negative effect are associated with a more severe phenotype compared to pathogenic variants that cause partial loss of p53 function [Rana et al 2019, de Andrade et al 2021, Rocca et al 2022]. The more severe phenotype is associated with an earlier onset of first cancer, higher incidence of breast cancer and other cancers, and a greater likelihood of meeting classic or modified Chompret criteria [Fortuno et al 2019, Rana et al 2019]. The six most common TP53 pathogenic variants that cause complete loss of function or a dominant-negative effect lie in the DNA-binding domain and include p.Arg175His, p.Gly245Ser, p.Arg248Gln, p.Arg248Trp, p.Arg273His, and p.Arg282Trp [Wasserman et al 2015, Fortuno et al 2019]. In a report from the German LFS registry, the incidence of childhood cancers was significantly lower in individuals with TP53 pathogenic variants that resulted in partial loss of p53 function [Penkert et al 2022].

TP53 pathogenic variant p.Arg337His, a founder variant in southern and southeastern Brazil, is associated with a high risk of childhood-onset ACC. Additional LFS-associated cancers have been reported in individuals with p.Arg337His; however, these cancers tend to occur at an older age and with decreased frequency compared to individuals with other TP53 pathogenic variants [Ferreira et al 2019]. Maternal inheritance of p.Arg337His was identified in 72% of individuals, suggesting preferential selection. One individual who was homozygous for p.Arg337His had a clinical phenotype that did not appear to differ from p.Arg337His heterozygotes [Ferreira et al 2019, Seidinger et al 2020].

Additional missense pathogenic variants are associated with lower risk of cancer and older age of onset compared to other TP53 pathogenic variants [Fortuno et al 2019, de Andrade et al 2021], including the following variants: p.Pro47Ser, p.Gly334Arg, p.Asp49His, Arg181Cys, p.Arg181His, and c.*1175A>C [Fischer et al 2023, Arnon et al 2024].

One study suggested that p.Pro152Leu is a reduced-penetrance variant [Evans et al 2023].

Penetrance

Penetrance in LFS is variable and is partially due to the type of pathogenic variant (see Genotype-Phenotype Correlations). For classic LFS, there is an 80% risk of cancer by age 70, with 22% of the cancers occurring between ages 0 and 15 years, 51% between ages 16 and 50 years, and 27% between ages 51 and 80 years [Amadou et al 2018]. However, low-penetrance TP53 pathogenic variants have been identified (see Genotype-Phenotype Correlations) [Ferreira et al 2019, de Andrade et al 2021, Penkert et al 2022]. Some TP53 variants that are suspected to be associated with low penetrance may have discordant variant classifications among different laboratories [Kratz et al 2021]. A study of 140 families with LFS found that affected individuals from 11% of families had a TP53 variant with clinically significant discordant classifications (e.g., variant of uncertain significance vs likely pathogenic variant) [Frone et al 2021]. Management recommendations for individuals with low-penetrance variants is evolving.

Genetic Modifiers

Genetic modifiers of LFS-associated cancer risk include the following:

Additional epigenetic modifiers are being investigated, including variants in the WNT signaling pathway, which appear to decrease cancer risk, and inherited epimutations in ASXL1, ETV6, and LEF1, which appear to increase cancer risk in individuals with germline TP53 pathogenic variants [Subasri et al 2023].

Nomenclature

As the clinical and molecular definitions of LFS have expanded, alternate terms have been proposed, including "Li-Fraumeni spectrum" and "heritable TP53-related cancer (hTP53rc) syndrome" [Frebourg et al 2020, Kratz et al 2021]. Historically, LFS was referred to as SBLA (sarcoma, breast, leukemia, and adrenal gland) syndrome.

Attenuated LFS. Individuals with a germline TP53 pathogenic variant who do not meet classic LFS or modified Chompret criteria may be categorized as attenuated LFS. Individuals with attenuated LFS have been shown to have an increased risk for developing LFS-related cancers, albeit with lower overall cancer risk and later age of onset compared to individuals with classic LFS. However, individuals categorized as attenuated LFS may be later determined to have classic LFS as personal and family history evolves over time [Rana et al 2018, Kratz et al 2021]. At this time, classification of LFS as attenuated may not change recommended surveillance.

Prevalence

The prevalence of germline TP53 pathogenic variants in the general population is estimated to be between 1:3,000 and 1:10,000 [de Andrade et al 2024].

The TP53 p.Arg337His founder pathogenic variant in southern and southeastern Brazil has a prevalence between 0.21% and 0.3% [Achatz & Zambetti 2016, Seidinger et al 2020]. This has led to population newborn screening for TP53 pathogenic variant p.Arg337His in Brazil [Achatz & Zambetti 2016].

Differential Diagnosis

Table 2.

Other Genes of Interest in the Differential Diagnosis of Li-Fraumeni Syndrome

Gene(s)DisorderMOICore Cancer(s)Typical Age at Cancer OnsetComments
BRCA1
BRCA2
BRCA1- & BRCA2-assoc hereditary breast & ovarian cancer ADBreast, ovary, pancreas, prostate, melanomaAdulthoodPathogenic variants in BRCA1 & BRCA2 are more likely to be identified in persons w/personal & family histories that include ER/PR/HER2-negative breast cancers, male breast cancer, ovarian cancer, advanced prostate cancer, & Ashkenazi Jewish ancestry, & do not include childhood cancers.
CHEK2 CHEK2 cancer susceptibility (OMIM 609265)ADBreast, colorectal, prostateAdulthoodPathogenic variants in CHEK2 are more likely to be identified in persons w/personal & family histories of predominantly breast, colon, & prostate cancers.
Note: Although CHEK2 cancer susceptibility has been referred to as "Li-Fraumeni syndrome 2," CHEK2 pathogenic variants are not assoc w/ACC, CNS tumors, or osteosarcoma, & CHEK2 should not be considered an LFS-related gene1
MLH1
MSH2
MSH6
PMS2
Constitutional mismatch repair deficiency (CMMRD; a variant of Lynch syndrome)ARColorectal, small bowel, hematologic, brainChildhoodCMMRD should be considered in persons w/childhood-onset GI cancer or polyps, malignant brain tumor, hematologic cancer, &/or café au lait macules.
POT1

POT1 tumor predisposition

ADMelanoma, CLL, glioma, angiosarcoma (esp cardiac angiosarcoma)AdulthoodPOT1 tumor predisposition should be considered in persons w/personal or family history of melanoma, CLL, glioma, &/or angiosarcoma.

ACC = adrenocortical carcinoma; AD = autosomal dominant; AR = autosomal recessive; CLL = chronic lymphocytic leukemia; CNS = central nervous system; ER = estrogen receptor; GI = gastrointestinal; HER2 = human epidermal growth factor receptor 2; LFS = Li-Fraumeni syndrome; MOI = mode of inheritance; PR = progesterone receptor

1.

Management

Clinical practice guidelines for Li-Fraumeni syndrome (LFS) have been published [Villani et al 2016, Kratz et al 2017, Kumamoto et al 2021].

Evaluations Following Initial Diagnosis

To establish the extent of disease and needs in an individual diagnosed with LFS, the evaluations summarized in Table 3 (if not performed as part of the evaluation that led to the diagnosis) are recommended.

Table 3.

Li-Fraumeni Syndrome: Recommended Evaluations Following Initial Diagnosis

System/ConcernEvaluationComment 1
All cancers
  • Complete physical exam w/high index of suspicion for cancer (incl blood pressure, full neurologic exam, & assessment of growth, sudden weight gain or loss, cushingoid appearance, or signs of virilization in a child) 2
  • Whole-body MRI w/o contrast 3
At diagnosis (all ages)
Breast cancer
  • Clinical breast exam
  • Breast MRI w/& w/o contrast
Beginning at age 20 yrs
CNS tumors
  • Neurologic exam
  • Brain MRI w/contrast
At diagnosis (all ages); 1st brain MRI is done w/contrast
GI cancers Upper endoscopy & colonoscopyBeginning at age 25 yrs
Melanoma Dermatologic examBeginning at age 18 yrs
Sarcomas Ultrasound of abdomen & pelvis
Genetic counseling By genetics professionals 4 w/experience in cancer genetics counselingTo obtain a pedigree & inform affected persons & their families re nature, MOI, & implications of LFS to facilitate medical & personal decision making
Family support
& resources
By clinicians, wider care team, & family support organizations 5Assessment of family & social structure to determine need for:

CNS = central nervous system; GI = gastrointestinal; LFS = Li-Fraumeni syndrome; MOI = mode of inheritance

1.

Individuals with a family history of LFS should begin surveillance at the ages listed in this table or 5-10 years before the onset of the cancer in the family, whichever comes first.

2.
3.

Evidence supports the use of whole-body MRI for surveillance in individuals with LFS [Ahlawat et al 2023]. Benefits include significantly increased detection of a variety of tumor types, which is important in a population at risk for diverse cancers. The risks of whole-body MRI include expense, difficulty with access, high false positive rate (especially with the baseline whole-body MRI), and the need for sedation in young children [Consul et al 2021, Kumamoto et al 2021, Ahlawat et al 2023, Kagami et al 2023].

4.

Medical geneticist, certified genetic counselor, certified advanced genetic nurse

5.

Individuals with LFS may need mental health support and resources due to the burden of intensive surveillance protocols and their personal and family cancer experiences [Forbes Shepherd et al 2021, Barnett et al 2022].

Treatment of Manifestations

Breast cancer. Bilateral mastectomy rather than lumpectomy is often recommended in those with LFS-related breast cancer to reduce the risk of a second primary breast cancer and to avoid radiation therapy [Siegel et al 2022].

Other cancers

  • Radiation therapy should be avoided if possible to reduce the risk of secondary malignancies [Kumamoto et al 2021]. Radiation-induced tumors and leukemias have been reported among individuals with LFS [Swaminathan et al 2019]. However, one small study found that four of 14 individuals with LFS treated with radiation who developed a malignancy within the radiation treatment field had local recurrence rather than a new primary cancer [Hendrickson et al 2020]. If clinically indicated, radiation therapy should be considered for individuals with LFS; close surveillance for the development of new cancers in the radiation field post-treatment is recommended.
  • The use of conventional cytotoxic chemotherapy may also pose an increased secondary cancer risk [Kumamoto et al 2021]. However, most experts recommend that after careful analysis of the risks and benefits, treatment efficacy should be prioritized above concerns about late effects.
  • Otherwise, standard oncologic management is recommended.

Note: In some hereditary cancer syndromes, tumor tissue testing for loss of heterozygosity (LOH) and other features in the tumor can be informative; however, this is not usually the case in LFS. Thus, molecular analysis of tumor tissue to identify LOH of TP53 is not recommended.

Prevention of Primary Manifestations

Breast cancer. Women with LFS have the option of risk-reducing bilateral mastectomy to decrease the risk of breast cancer [Siegel et al 2022].

Colorectal cancer. Adults with LFS should have screening colonoscopy examinations, which can be considered surveillance as well as primary prevention of colorectal cancer [MacFarland et al 2019a].

Skin cancer. Dermatologic surveillance can be used to detect and remove premalignant lesions [Hatton et al 2022].

Surveillance

Surveillance guidelines for adults and children with LFS have been developed and modified from the Toronto protocol [Villani et al 2016, Kratz et al 2017, Kumamoto et al 2021]. Other published guidelines (e.g., American Association for Cancer Research and National Institute for Health and Care Excellence guidelines) may differ slightly from the recommendations in Table 4 due to the lack of definitive data on the efficacy of these strategies.

Table 4.

Li-Fraumeni Syndrome: Recommended Surveillance

System/ConcernEvaluationFrequency 1
All cancers Comprehensive physical exam w/high index of suspicion for cancer (incl blood pressure, full neurologic exam, & assessment of growth, sudden weight gain or loss, cushingoid appearance, &/or signs of virilization in a child) 2
  • Every 3-4 mos from birth to age 18 yrs
  • Every 6 mos from age ≥18 yrs
Whole-body MRI 3Annually at all ages
ACC Ultrasound of abdomen & pelvisEvery 3-4 mos from birth to age 18 yrs (not on same visit as whole-body MRI)
Serum total testosterone, dehydroepiandrosterone sulfate, & androstenedioneIf ultrasound is unsatisfactory
Breast cancer Clinical breast examEvery 6-12 mos starting between age 20-25 yrs
Breast MRI w/& w/o contrastAnnually starting between age 20-30 yrs
Mammogram & breast MRI w/& w/o contrastAnnually, alternating mammogram & breast MRI every 6 mos, in those age 30-75 yrs
CNS tumors Brain MRI w/o contrast (initial brain MRI at diagnosis w/contrast) 4Annually
GI cancers Upper endoscopy & colonoscopyEvery 2-5 yrs from age ≥25 yrs
Leukemia/
Lymphoma
None recommended 5NA
Melanoma Dermatologic examAnnually from age ≥18 yrs
Sarcomas Whole-body MRIAnnually at all ages
Ultrasound of abdomen & pelvisAnnually from age ≥18 yrs
Lung cancer Consider low-dose spiral CTConsider screening adults (need, frequency, & age to begin screening depends on family history of lung cancer &/or history of smoking).
Pancreatic cancer Consider contrast-enhanced MRI/MRCP &/or EUS in a research setting to better delineate risks & benefits of pancreatic cancer surveillance.Consider annually from age ≥50 yrs. 6
Prostate cancer Consider PSA blood test.Consider annually from age ≥40 yrs.
Thyroid cancer Consider thyroid ultrasound.Consider screening children & adults (need, frequency, & age to begin screening depends on family history &/or other risk factors).
Family/Community Assess family need for social work support or follow-up genetic counseling if new questions arise (e.g., family planning). 7At each visit

ACC = adrenocortical carcinomas; CNS = central nervous system; EUS = endoscopic ultrasound; MRCP = magnetic resonance cholangiopancreatography; GI = gastrointestinal; NA = not applicable; PSA = prostate-specific antigen

1.

Individuals with a family history of LFS should begin surveillance at the ages listed in this table or 5-10 years before the onset of the cancer in the family, whichever comes first.

2.
3.

Evidence supports the role of whole-body MRI in individuals with LFS [Ahlawat et al 2023]. Benefits of whole-body MRI include significantly increased ability to detect a variety of tumor types, which is important in a population at risk for diverse cancers. The risks of whole-body MRI include expense, difficulty with access, high false positive rate (especially with baseline whole-body MRI), and the need for sedation in young children [Consul et al 2021, Kumamoto et al 2021, Ahlawat et al 2023, Kagami et al 2023].

4.

The first brain MRI should be done with contrast, and subsequent brain MRIs may be done without contrast if the previous MRI was normal and there are no new clinical manifestations [Kratz et al 2017, Kumamoto et al 2021].

5.

Interim blood counts and inflammatory biomarkers have not been shown to have independent benefit for cancer detection [Oba et al 2022].

6.

National Comprehensive Cancer Network (NCCN) guidelines suggest pancreatic cancer surveillance only if the individual has ≥1 first- or second-degree relative with exocrine pancreatic cancer (www​.nccn.org; subscription required); however, others suggest that pancreatic cancer surveillance should be considered in all individuals with LFS [Abe et al 2021].

7.

Individuals with LFS recognize the value of surveillance but may need additional mental health support and resources due to the burden of intensive surveillance protocols and their personal and family cancer experiences. More research is needed in this area [Forbes Shepherd et al 2021, Barnett et al 2022].

Agents/Circumstances to Avoid

Individuals with LFS are encouraged to avoid or minimize exposures to known or suspected carcinogens, including ionizing radiation, unprotected sun exposure, tobacco use, occupational exposures, and excessive alcohol use, because the effects of carcinogenic exposures and germline TP53 pathogenic variants may be cumulative.

Evaluation of Relatives at Risk

If a molecular diagnosis of LFS has been established in the proband, it is recommended that TP53 molecular genetic testing be offered to all first-degree relatives (including children) as well as to more distant relatives (e.g., aunts, uncles, and cousins) in order to identify individuals with LFS who would benefit from increased cancer monitoring, with attention to symptoms or signs of cancer and early intervention when a cancer or precancer is identified. If the proband is a child, then cascade testing would typically begin with the child's sibs and parents.

Since the risks of LFS-related cancers are increased at all ages, including infancy and childhood, it is recommended that TP53 testing be offered to individuals at birth (via cord blood analysis) or soon after birth. In families who are not ready to test very young children, the issues in initiating intensive surveillance should be discussed.

If a clinical diagnosis of LFS has been established in the proband but the proband does not have an identified TP53 pathogenic variant, all at-risk family members should be counseled regarding their potential increased risks for LFS-related cancers and options for surveillance and risk reduction.

See Genetic Counseling for issues related to testing of at-risk relatives for genetic counseling purposes.

Pregnancy Management

Female with LFS. Women with LFS who are pregnant should report any signs or symptoms of cancer to their physicians. Women with LFS who are pregnant can continue to have clinical breast exams and/or breast imaging studies if indicated.

Heterozygous fetus. There are no specific recommendations for surveillance of a fetus identified as having a germline TP53 pathogenic variant. Following delivery, the infant should begin recommended cancer screening (see Surveillance).

Rare risk of gestational choriocarcinoma. Gestational choriocarcinoma and other gestational trophoblastic disease has been reported in women with LFS and in women carrying a fetus heterozygous for a paternally inherited TP53 pathogenic variant [Brehin et al 2018, Cotter et al 2018]. There are no established guidelines for beta-human chorionic gonadotropin blood level screening; however, this screening can be considered as clinically appropriate.

Therapies Under Investigation

There are efforts to identify medications that can reduce the risk of cancer in individuals with LFS. One medication that looks promising is metformin; additional clinical trials investigating metformin are planned by groups in the United States, Canada, Germany, and the United Kingdom [Pantziarka & Blagden 2022, Rocca et al 2022].

There are also studies evaluating the clinical application and utility of cell-free DNA for early cancer detection in individuals with LFS. One study looked at the efficacy of a multimodal liquid biopsy assay in a longitudinal cohort of 89 individuals with LFS. The results showed that cancer-associated signal(s) were detected in individuals with LFS prior to identification of cancer by conventional screening (positive predictive value = 67.6%; negative predictive value = 96.5%) [Wong et al 2024].

Search ClinicalTrials.gov in the US and EU Clinical Trials Register in Europe for access to information on clinical studies for a wide range of diseases and conditions.

Other

Additional resources include the Li-Fraumeni Exploration (LiFE) Research Consortium, Li-Fraumeni syndrome association (LFSA), Living LFS, and the LiFT Up study.

Genetic Counseling

Genetic counseling is the process of providing individuals and families with information on the nature, mode(s) of inheritance, and implications of genetic disorders to help them make informed medical and personal decisions. The following section deals with genetic risk assessment and the use of family history and genetic testing to clarify genetic status for family members; it is not meant to address all personal, cultural, or ethical issues that may arise or to substitute for consultation with a genetics professional. —ED.

Mode of Inheritance

Li-Fraumeni syndrome (LFS) is inherited in an autosomal dominant manner.

Risk to Family Members

Parents of a proband

  • Most individuals diagnosed with LFS inherited a TP53 pathogenic variant from a parent.
  • Some individuals diagnosed with LFS have the disorder as the result of a de novo germline pathogenic variant. The frequency of de novo pathogenic variants is estimated at between 7% and 20%. A 14% de novo rate was reported in one series; about one fifth of the de novo pathogenic variants in this series were mosaic [Renaux-Petel et al 2018].
  • If a TP53 pathogenic variant has been identified in a proband and a diagnosis of LFS has not already been established in one of the parents, molecular genetic testing is recommended for the parents of the proband. If one parent has a significant personal and/or family history of cancer, that parent should be tested first. Otherwise, the parents can be tested simultaneously.
  • If a TP53 pathogenic variant is identified in a parent, the parent should be followed by appropriate medical surveillance (see Surveillance).
  • If a TP53 pathogenic variant identified in the proband is not identified in either parent and parental identity testing has confirmed biological maternity and paternity, the following possibilities should be considered:
  • The family history of some individuals diagnosed with LFS may appear to be negative because of failure to recognize the disorder in family members, a small family size, variable expressivity, early death of the parent before the onset of symptoms, or late onset of cancer in the affected parent. Therefore, an apparently negative family history cannot be confirmed unless a molecular diagnosis has been established in the proband and molecular genetic testing has demonstrated that neither parent is heterozygous for the pathogenic variant identified in the proband.
  • If a TP53 pathogenic variant has not been identified in a proband who meets classic criteria for LFS and a diagnosis of LFS has not already been established in one of the parents, both parents should be counseled regarding their potential increased risks for LFS-related cancers and the options for surveillance and risk reduction.

Sibs of a proband. The risk to sibs of the proband depends on the status of the proband's parents:

  • If a molecular diagnosis of LFS has been established in the proband (i.e., the proband has a known germline TP53 pathogenic variant) and:
  • If a clinical diagnosis of LFS has been established in the proband but a TP53 pathogenic variant has not been identified in the proband, sibs should be counseled regarding their potential increased risks for LFS-related cancers and the options for surveillance and risk reduction.

Offspring of a proband

  • Each child of an individual with a molecular diagnosis of LFS has a 50% risk of inheriting the TP53 pathogenic variant.
  • Each child of an individual with a clinical diagnosis of LFS (in whom a TP53 pathogenic variant has not been identified) is presumed to have an increased risk for LFS.

Other family members

  • The risk to other family members (e.g., aunts, uncles, cousins) depends on the genetic status of the proband's parents: if a parent has the TP53 pathogenic variant, the heterozygous parent's family members may be at risk. Family history and molecular genetic testing can help determine whether maternal or paternal relatives are at increased risk.
  • If the TP53 pathogenic variant occurred as a postzygotic de novo event in the proband, it is presumed that neither parent of the proband has the TP53 pathogenic variant and other family members are not at increased risk for LFS.

Related Genetic Counseling Issues

Testing of at-risk asymptomatic individuals. Consideration of molecular genetic testing of young, at-risk family members is appropriate for guiding medical management (see Management, Evaluation of Relatives at Risk).

Molecular genetic testing can be used with certainty to clarify the genetic status of at-risk family members if a clinically diagnosed relative has undergone molecular genetic testing and is found to have a pathogenic variant in TP53.

The use of molecular genetic testing for determining the genetic status of at-risk relatives when a TP53 pathogenic variant has not been identified in a clinically diagnosed relative is problematic, and test results need to be interpreted with caution. A positive test result in the at-risk family member indicates the presence of a TP53 pathogenic variant and that the same molecular genetic testing method can be used to assess the genetic status of other, at-risk family members. In contrast, a "negative" molecular genetic test result in an at-risk family member is uninformative (i.e., the result does exclude the possibility that the family member has LFS).

Because cancer screening for individuals with LFS begins in infancy, molecular genetic testing is offered to at-risk children and adolescents.

Parents are motivated to arrange testing for their offspring to clarify their child's cancer risk status and the need for enhanced surveillance. Special consideration should be given to education of the children and their parents prior to genetic testing, and older children and adolescents should be given the option of assenting to the test. The method of results disclosure should be discussed and agreed upon by the provider, parent(s), and older child/adolescent.

Living with a diagnosis of LFS can take an emotional toll on individuals, especially those in the adolescent / young adult age group. Individuals in this age group describe the burden of coping with one or more cancer diagnoses and/or living with the anticipation and fear of cancer as well as a range of family communication challenges [Rising et al 2022, Werner-Lin et al 2023].

Obtaining a family history in a proband suspected of having LFS includes obtaining information on all childhood- and adult-onset malignancies (e.g., age of onset, type of malignancy) among first-, second-, and third-degree relatives. Family history may be incorrect or incomplete for a variety of reasons (e.g., the topic of cancer may be avoided or a death in the family may have led to estrangement). In addition, obtaining a cancer history for a proband with suspected LFS is often emotionally charged because of the number of cancer-related illnesses and deaths among close relatives.

Genetic cancer risk assessment and counseling. For a comprehensive description of the medical, psychosocial, and ethical ramifications of identifying at-risk individuals through cancer risk assessment with or without molecular genetic testing, see Cancer Genetics Risk Assessment and Counseling – for health professionals (part of PDQ®, National Cancer Institute).

Family planning

  • The optimal time for determination of genetic risk and discussion of the availability of prenatal/preimplantation genetic testing is before pregnancy.
  • It is appropriate to offer genetic counseling (including discussion of potential risks to offspring and reproductive options) to young adults who are affected or at risk.

DNA banking. Because it is likely that testing methodology and our understanding of genes, pathogenic mechanisms, and diseases will improve in the future, consideration should be given to banking DNA from probands in whom a molecular diagnosis has not been confirmed (i.e., the causative pathogenic mechanism is unknown). For more information, see Huang et al [2022].

Prenatal Testing and Preimplantation Genetic Testing

If a TP53 pathogenic variant has been identified in an affected family member, prenatal and preimplantation genetic testing are possible.

Differences in perspective may exist among medical professionals and within families regarding the use of prenatal and preimplantation genetic testing. While most health care professionals would consider use of prenatal and preimplantation genetic testing to be a personal decision, discussion of these issues may be helpful.

Resources

GeneReviews staff has selected the following disease-specific and/or umbrella support organizations and/or registries for the benefit of individuals with this disorder and their families. GeneReviews is not responsible for the information provided by other organizations. For information on selection criteria, click here.

Molecular Genetics

Information in the Molecular Genetics and OMIM tables may differ from that elsewhere in the GeneReview: tables may contain more recent information. —ED.

Table A.

Li-Fraumeni Syndrome: Genes and Databases

Data are compiled from the following standard references: gene from HGNC; chromosome locus from OMIM; protein from UniProt. For a description of databases (Locus Specific, HGMD, ClinVar) to which links are provided, click here.

Table B.

OMIM Entries for Li-Fraumeni Syndrome (View All in OMIM)

151623LI-FRAUMENI SYNDROME; LFS
191170TUMOR PROTEIN p53; TP53

Molecular Pathogenesis

TP53 encodes p53, which has been termed the guardian of the genome and has many important cellular functions, especially in response to stress (e.g., DNA damage, oncogene activation, nutrient deprivation, oxidative stress). Cellular stress induces the activation, stabilization, and accumulation of p53, which can initiate various responses including cell cycle arrest, apoptosis, senescence, DNA repair, and cell differentiation [Rocca et al 2022].

It has been proposed that p53 is a central driver in creating a cellular microenvironment that is conducive to tumor formation and growth. This theory, termed the precancerous niche hypothesis, may eventually lead to possible treatment options [Pantziarka & Blagden 2022].

Mechanism of disease causation. Germline TP53 pathogenic variants result in loss of function by creating a constitutive defect of p53 DNA binding and decreased transcriptional response to DNA damage. Some TP53 pathogenic variants have a dominant-negative effect, reducing the function of the normal allele in cells that have not acquired a secondary somatic pathogenic variant.

TP53-specific laboratory technical considerations. TP53 missense variants are commonly identified in tumor tissue. An alternate tissue that is free from cancerous cells (e.g., leukocytes from blood [except in those with leukemia], saliva, skin) is necessary to identify a germline TP53 pathogenic variant.

Identification of a TP53 pathogenic variant with low allele frequency (e.g., significantly less than 50%) may be indicative of mosaicism, clonal hematopoiesis of indeterminate potential (CHIP), hematologic malignancy or premalignancy, or circulating tumor cells [Batalini et al 2019, Coffee et al 2020, Mester et al 2020, Schwartz et al 2021, Castillo et al 2022]. Individuals with constitutional or early postzygotic TP53 mosaicism have an increased risk of LFS-related cancers; individuals with CHIP do not [Batalini et al 2019].

Table 5.

TP53 Variants Referenced in This GeneReview

Reference SequencesDNA
Nucleotide
Change
Predicted
Protein
Change
Comment [Reference]
NM_000546​.6
NP_000537​.3
c.139C>Tp.Pro47SerSee Genotype-Phenotype Correlations.
c.145G>Cp.Asp49His
c.215G>Cp.Arg72ProSee Genetic Modifiers.
c.455C>Tp.Pro152LeuSee Genotype-Phenotype Correlations.
c.524G>Ap.Arg175His
c.541C>Tp.Arg181Cys
c.542G>Ap.Arg181His
c.733G>Ap.Gly245Ser
c.743G>Ap.Arg248Gln
c.742C>Tp.Arg248Trp
c.818G>Ap.Arg273His
c.844C>Tp.Arg282Trp
c.1000G>Cp.Gly334Arg
c.1010G>Ap.Arg337HisHigh risk of ACC; low-penetrance allele for other LFS cancers; founder variant in southern Brazil [Ferreira et al 2019]
NM_000546​.6 c.*1175A>C
(rs78378222)
--See Genotype-Phenotype Correlations.
NG_017013​.2 16-bp duplication in intron1
(rs17878362)
--See Genetic Modifiers.

Variants listed in the table have been provided by the authors. GeneReviews staff have not independently verified the classification of variants.

GeneReviews follows the standard naming conventions of the Human Genome Variation Society (varnomen​.hgvs.org). See Quick Reference for an explanation of nomenclature.

ACC = adrenocortical carcinoma; LFS = Li-Fraumeni syndrome

1.

Variant designation that does not conform to current naming conventions

Chapter Notes

Author Notes

Kim E Nichols, MD
Director, Division of Cancer Predisposition
St Jude Children's Research Hospital
262 Danny Thomas Place
Memphis, TN 38105
901-595-8385 (phone)
901-595-6086 (fax)
Email: gro.edujts@slohcin.mik
Web: www.stjude.org/directory/n/kim-nichols

Dr Nichols is a pediatric oncologist with clinical and research interests in cancer predisposition and primary immunodeficiency.

Acknowledgments

We wish to acknowledge Dr Frederick P Li, Dr Joseph F Fraumeni, and Dr. Thierry Frebourg for their contributions.

Author History

Judy Garber, MD, MPH (2010-present)
Frederick P Li, MD; Dana Farber Cancer Institute (1998-2010)
Kim E Nichols, MD (2013-present)
Katherine A Schneider, MPH (1998-present)
Alison Schwartz Levine, MS, LGC (2024-present)
Kristin Zelley, MS (2013-present)

Revision History

  • 5 September 2024 (sw) Comprehensive update posted live
  • 21 November 2019 (sw) Comprehensive update posted live
  • 11 April 2013 (me) Comprehensive update posted live
  • 9 February 2010 (me) Comprehensive update posted live
  • 12 October 2004 (me) Comprehensive update posted live
  • 3 October 2002 (me) Comprehensive update posted live
  • 19 January 1999 (me) Review posted live
  • 24 July 1998 (ks) Original submission

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