flow chart

Figure 3-2Flow chart depicting the main components and associated processes in the transcriptomic data analysis and TRV derivation

The green-colored processes and decision points are associated with the sequence processing, normalization, and quality evaluation. The blue-colored processes and decision point are associated with the dose response analysis, gene set summarization, and POD identification. The orange-colored processes are associated with the HED calculation and TRV derivation. The gray-color indicates a terminal node for the ETAP or samples.

From: 3, METHODS

Cover of Standard Methods for Development of EPA Transcriptomic Assessment Products (ETAPs)
Standard Methods for Development of EPA Transcriptomic Assessment Products (ETAPs).
Auerbach S, Casey W, Chang D, et al.
Washington (DC): U.S. Environmental Protection Agency; 2024 Mar.
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