Conserved Protein Domain Family
C_Hendra

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pfam16821: C_Hendra 
C protein from hendra and measles viruses
This is a family of C proteins from a number of Morbillivirus species.
Statistics
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PSSM-Id: 374824
Aligned: 9 rows
Threshold Bit Score: 124.834
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
YP_009091835   4 KLLNSFRKIR-------MRSKRPMEDPK-FKSQEPEKEQQPG--SSLFGVRIQDPKEIEWLEWINKIQLRDEMTmadpIL 73 
Q9WS38         1 MPLKFWKRLM-------PPKKKSSETLTlLSNQEPLSMQDPPlvRSSTRSSIYPPVIKKGEHRAKTKRNQELAE----QL 69  Tupaia paramyxo...
Q49HN8         4 KLPNFFRRIR-------RTFRRRTGEVQ-LDYQPPKKESQPG--KPLQRLPMESRSSWVEETEKIREENKLKAKti-lVA 72  J-virus
AEU08859       4 KLSNFYNRVR-------RTFRRRTAEVQ-SRNQPPEQGFKPG--NPSIPIMITPVIKIREIRELKREQTRARARel-lQL 72 
Q287X7        12 RLSSFYSRVR-------KTFRRRTAEVP-SRSRRQEPESKVG--SPAIPIMITPVIKIREARELKREQTRARARel-lQL 80  Beilong virus
AFP87276       4 LLSILYRKIR-------KNYSILTEDPP-SESHPQVSGLKSG--RNLFERSLLDLNKFKGEDLRLRSQAIMEIEailpIL 73 
AEQ38096       5 ILLTLFRRTK-------KKYKRHTDDQA-SNNQVPKTGQEHG--RTSCRAPVENMNRLRGECLRMMEVLKEEMWriypVL 74 
AFH55522       1 MASNLYKRSK-------ATLRLPKMSILpGRFTNPLDKQEHL------QCKEEPLREIILRQGVTMTQCIAKDQvllfQV 67 
Q9IZB9        12 RFLQILKSKRinplenqESHYRTLESIT-EKTTMPNSGKTSK--KSIYLCKRDPSAMSNSASRVEIKTIAHELRqeirKE 88  Salem virus
YP_009091835  74 LPEMERLEKAVPIISHGPAGEMIYSWVQ--WYKTLRSMIMELNYPTLEGLNQLLDAGVLTRAEHQIGKEVLRVISTICPT 151
Q9WS38        70 LKELPHETTSIANLVQRNNRDLDYNLEQ--LVRTLLQMEKEGTHVTESLINTLMETDTLTPKEQALIWPAYNLVRQMMHH 147 Tupaia paramyxo...
Q49HN8        73 MDMVEKRYPPAQILQLYSCRDLITKYGM--VRMLLLIVAEKGEIPGIN-MGGLIQARLLTQEEVTNLMEAVPIVRLMLET 149 J-virus
AEU08859      73 MEDMEINPRVTGMTQRLGSKGQINRYGM--LRIMMGIVAEIGEIPQVD-FQRLEKEAILSSQEIKNLRDIIPTVQLMLES 149
Q287X7        81 MEDMEINPQITGVTPKTSTKGQINRYGM--LRIMMGIVAELGEVPQVD-FPRLEKEGILSQQEIKNLRDTIPTVQLMLES 157 Beilong virus
AFP87276      74 IREAESQDNSKKGIKNGGHKIQNYNWTQ--WLYTISSMTREGRIPTMENMTAALKNGIISEKEHDRISTIISLLMNYCPA 151
AEQ38096      75 LPQMELLDKECQTPELGQKIQMTYNWTQ--WLQTLYTMIMEENVPDMDLLQALREGGVITCQEHTMGMYVLYLIQRCCPM 152
AFH55522      68 LTRISKDLLDSIIQDYGIQRVTSACYSKamMMKTIIQRLMAGLPLSKDWMNRIMRTQLLNNQEISVLRECLRLIHLLVPR 147
Q9IZB9        89 ISKWIQKQQVKSVVPQDLHVETQ-------ILLTMLSRLAEGELLTQDWQRSVLKEIQDSAITCEVMDQLVAMILDLFPR 161 Salem virus
YP_009091835 152 YQ 153
Q9WS38       148 AA 149 Tupaia paramyxovirus
Q49HN8       150 LG 151 J-virus
AEU08859     150 IV 151
Q287X7       158 II 159 Beilong virus
AFP87276     152 YN 153
AEQ38096     153 LP 154
AFH55522     148 KL 149
Q9IZB9       162 KY 163 Salem virus
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