6BK6


Conserved Protein Domain Family
Matrix

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pfam00661: Matrix 
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Viral matrix protein
Found in Morbillivirus and paramyxovirus, pneumovirus.
Statistics
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PSSM-Id: 395535
Aligned: 7 rows
Threshold Bit Score: 465.722
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6BK6_A        34 VSDFSPTSWENGGYLDKVEPEIDKHGS--MIPKYKIYTPGANERKFNNYMYMICYGFVEDveRSPESG--------KRKK 103 Hendra henipavirus
Q9DLD5         8 GLYFDSAHSSSNLLAFPIVLQDTGDGKkqIAPQYRIQRLDLWTDSKEDSVFITTYGFIFQ--VGNEEAtvgiiddkPKRE 85  Newcastle disea...
Q9W850         4 IYDFDKSAWDIKGSIAPIQPTTYSDGR--LVPQVRVIDPGLGDRKDECFMYMFLLGVVED--SDPLGPpig--------- 70  Measles virus s...
Q9JG20         9 PLPKPPDSDSQRLNAFPVIMAQEGKGR--LLRQIRLRKILSGDPSDQQITFVNTYGFIRA--TPETSEfisessqqKVTP 84  Mumps virus Miy...
Q6YIS2         4 IAEFNPVTWAEHGSLSPMLLEQGPDKK--IIPQYRFIAPKPEAGRTKMDWYLTLSGIIEC--KSQSGAgsdtapttSGKK 79  Reptilian ferla...
O57299         4 IYRFPKFSYEDNGTVEPLPLRTGPDKK--AIPHIRIVKVGDPPKHGVRYLDLLLLGFFETpkQTASLGsvsdltehTGYS 81  Sendai virus (s...
YP_009094149   4 TSEFSRKTWEENGTVEPVEFATDKDGV--AVPTIRMTSAGDFSHKGEPYIYLMLLGFVEKviee--------ggsqRKGK 73 
6BK6_A       104 IRTIAAYPLGVGKSTSHPQDLLEELCSLKVTVRRTAGATEKIVFGSSGPLHHLLPWKKILTGGSIFNAVKVCRNVDQIQL 183 Hendra henipavirus
Q9DLD5        86 LLSAAMLCLGSVPNTGDLIELARACLTMMVTCKKSATNTERMVFSVVQAPQVLQSCRVVANKYSSVNAVKHVKAPEKIPG 165 Newcastle disea...
Q9W850        71 -raFGSLPLGVGRSTAKPEELLKEATELDIVVRRTAGLNEKLVFYNNTPLTLLTPWRKVLTTGSVFNANQVCNAVNLIPL 149 Measles virus s...
Q9JG20        85 VVTACMLSFGAGPVLEDPQHMLKALDQTDIRVRKTASDKEQILFEINRIPNLFRHHQISADHLIQASSDKYVKSPAKLIA 164 Mumps virus Miy...
Q6YIS2        80 IVSMGMIPLGVGHTRETPDALLDAVVKLKITVRRTARSSETLIFTFAEVDPRLAPWNYNLKSGMGFPSMKVSSQAHLIPV 159 Reptilian ferla...
O57299        82 ICGSGSLPIGVAKYHGSDQELLKACTDLRITVRRTVRAGEMIVYMVDSIGAPLLPWSGRLRQGMIFNANKVALAPQCLPV 161 Sendai virus (s...
YP_009094149  74 MYCYGAMPLGMARTHYNEQALLEASGNLRITVRRTAGGGEKAVFGVSGVTSPLMPWKNALSGGMIYPALKTLSAPYKIPL 153
6BK6_A       184 EKQQSLRIFFLSITKLNDSGIYMIPRTMLEFRRNNAIAFNLLVYLKIDADLAKAGIQGSFDKDGTKV--ASFMLHLGNF- 260 Hendra henipavirus
Q9DLD5       166 SGTLEYKVNFVSLTVVPKKDVYKIPAAVLKISGSSLYNLALNVTINVEVDPRSPLVKSLSKSDSGYY--ANLFLHIGLMt 243 Newcastle disea...
Q9W850       150 DTPQRFRVVYMSITRLSDNGYYTVPRRMLEFRSVNAVAFNLLVTLRIDKAIGPGKII----DNAEQLpeATFMVHIGNF- 224 Measles virus s...
Q9JG20       165 GVNYIYCVTFLSVTVCSASLKFRVARPLLAARSRLVRAVQMEVLLRVTCKKDSQMAKSMLSDPDGEGciASVWFHLCNLc 244 Mumps virus Miy...
Q6YIS2       160 DQRCTMRGVFLIITALGSGSYYKIPRPIQNLTIADTISVNFLVGLTTDGDLSKAGLMTTRDSEGHHT--VETMIHLGIF- 236 Reptilian ferla...
O57299       162 DKDIRFRVVFVNGTSLGAITIAKIPKTLADLALPNSISVNLLVTLKTGISTEQKGVLPVLDDQGEKK--LNFMVHLGLI- 238 Sendai virus (s...
YP_009094149 154 GVKVRMRVIFVSGTILGDITIYKIPKALLDVRVPQSISFNLNVIIATGAKLSARGIDPVMTPEGQQT--VSFLVHIGHF- 230
6BK6_A       261 -VRRAGKYYSVEYXKRKIDRMKLQFSLGSIGGLSLHIKINGVISKRLFAQMGFQKNLCFSLMDINPWLNRLTWNNSCEIS 339 Hendra henipavirus
Q9DLD5       244 tVDRKGKKVTFDKLEKKIRSLDLSVGLSDVLGPSVLVKARGARTKLLAPFFSSSGTACYPIANASPQVAKILWSQTACLR 323 Newcastle disea...
Q9W850       225 -RRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHIRSTGKMSKTLHAQLGFKKTLCYPLMDINEDLNRLLWRSRCKIV 303 Measles virus s...
Q9JG20       245 kGRNKLRSYDENYFASKCRKMNLTVSIGDMWGPTILVHAGGHIPTTAKPFFNSRGWVCHPIHQSSPSLAKTLWSSGCEIK 324 Mumps virus Miy...
Q6YIS2       237 -KRTKGKSYTVEYCQAKVLAMDLTFALAGVGGVSLHVIVNGKISKQLLTQLAGHRSICYSLMDINPKINSVLWRPMVEIS 315 Reptilian ferla...
O57299       239 -RRKVGKIYSVEYCKSKIERMRLIFSLGLIGGISFHVQVTGTLSKTFMGQLAWKRAVCFPLMDVNPHMNLVIWAASVEIT 317 Sendai virus (s...
YP_009094149 231 -VRDRKKVYSADYCRHKVDMMGLKFSLGNVGGVSFHVAITGKMSKTLMTSIGFKKNICYPLMDTNPTLNSIMWASSAEIC 309
6BK6_A       340 RVAAVLQPSVPREFMIYDDVFIDNTGKI 367 Hendra henipavirus
Q9DLD5       324 SVKIIIQAGTQRAVAVTADHEVTSTKLE 351 Newcastle disease virus B1/48
Q9W850       304 RIQAVLQPSVPQEFRIYDDVIINDDQGL 331 Measles virus strain Ichinose-B95a
Q9JG20       325 AASAILQGSDYASLAKTDDIIYSKIKVD 352 Mumps virus Miyahara vaccine
Q6YIS2       316 YIKAVFQPSIPKEFKIYSDVIVKKAGRv 343 Reptilian ferlavirus
O57299       318 DVDAVFQPAIPRDFRYYPNVVAKNIGRI 345 Sendai virus (strain Ohita)
YP_009094149 310 SVSAVFQPSVPREFKYHDDIVVEGsgrv 337
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