Conserved Protein Domain Family
Casc1_C

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pfam12366: Casc1_C 
Cancer susceptibility candidate 1 C-terminal
This is the C-terminal domain of Cancer susceptibility candidate 1 (Casc1) which has many SNPs associated with cancer susceptibility.
Statistics
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PSSM-Id: 432508
Aligned: 9 rows
Threshold Bit Score: 393.357
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WGS:AAPP:GF10193-PB  784 EVTHWTTKHIIDLEINKVTHKLTFKTDRLGIFGLAFKRydhfpfrewslqpneenPEEVIFSLDTFHVRILFYISAKGVR 863 
EDW44297             717 QVTHWTTKYVKDTVIDRETNRITFKTDRLGLLGLAFKR-----------------PDEIILSVDTFHVRIFFYITCKGVR 779 
WGS:AAPP:GF10195-PB  853 KVTHWTTEYILESNFDYELKVLTVKTDRLGDFGFAYPRyihfpfrnweldqnelnPDELIFTVDTQFVRVVFFISNKGIR 932 
XP_002068326         909 KVIHWTTKYIQRTELDRDNLIVTVRTDRVGLFGFAFKRyahfpfrhwcmepseenANEIVFTLDTFHVRVVLYISNKGIR 988 
XP_001983474         887 KVKHWTTKYIKRTEYDPQSFTFKIQTDRLGIFGFACKRyehfpfrhwqlqyneenSDEIIFTLDTHHVRIVLFITNAGIR 966 
XP_002012193         882 KVKHWTTRYIKHTEFLPESCTLKIQTDRLGVFGFAFKSyehfpfkgwslqynkdnINEIIFTLDTYHVRVVLFITNAGIR 961 
WGS:AANI:GJ12586-PA  928 KVKHWTTKYINRTVFEPETLTIKIQTDRLGIFGFAYKRyeqfpfrnwtlqyneedINEIVFKLDTFHVSIYLFITNAGIR 1007
WGS:AANI:GJ12585-PA  829 KVIRWSTRHIMSSQFDRQARTMHIKTDRLGIFGLAYKRyehfpfrdwsmqpneenNEEIILSVDTFHARVILYITAQGIR 908 
WGS:AAQB:GK13457-PA  852 QVLHWTTKYILESHFNREEATITLKTDRLGIFGLAFKRyehfpfkdwymqpseenPEEIMLRVDTFHVRVILYISGLGIR 931 
WGS:AAPP:GF10193-PB  864 GYVTDIIKGYAAKPVKYLEIKEPIVDFKMLRKIFVAKNINIFAEHDASFYITNGYYSMKHVASEQHTYKMMALHCKSMKF 943 
EDW44297             780 GYVTDLSKGYTAKPIKYLEIVEPISDFRQMRQIFINKNINIFAENDASFYIENGYFSMKHVALEMHTYNIMALHCKLMKF 859 
WGS:AAPP:GF10195-PB  933 GYVIDIPKEYVANPLKYLEITEPIVDFVELRKRFQDMNLNVFAELDASCYIDQGYFSIKHLAAELHVYDIMSIHCKLMKF 1012
XP_002068326         989 GYVTDLTKEYTAKPVKYMTIEEPIFDFGDFRKRFQEKNVNIFAEHDAKFYIENGYYSLKMLALELHVYDAMAIHCKMIKF 1068
XP_001983474         967 GYVTKLTDEYVAKPVKYVEIEQPISDYRELRRRFCEKNVNIFAENDALFYIENGYFSVKHLAAELHVYDAFAVHCKLVKF 1046
XP_002012193         962 GYATKIIEEYVANPIKYLEIKEPTSDFTELRRRFCENNINIFAAHDACYYIEKGYFSQKHLATELHVYDAFAIHCKLIKF 1041
WGS:AANI:GJ12586-PA 1008 GYVTKMTTEYTARPVKYLEIKEPISDYRELRRRFCEKNINIFAEHDACYYIENGYFSEKHLATELHVYDAFAIHCKLMKF 1087
WGS:AANI:GJ12585-PA  909 GYVTDITKNYVAHPVKYLDIPNPISDIRELRRRFYEKSINIFAENDACFYIDNGYFSVKHVATEDHTYDAMALHCKLMKF 988 
WGS:AAQB:GK13457-PA  932 GYVTDQSKAYVTKPKKYLEIIEPISDFQELRQRFWEKNINIFAEHDASFYIDNGYFTIKHVAIEDHTYDAMALHCKLIKF 1011
WGS:AAPP:GF10193-PB  944 YRSSWNRLANRRDIILGMKLAKDNTDYSEVTVRIQPESTTFVTVTENCSDQENVIVLSYKNT 1005
EDW44297             860 YRSSWNRLADRRDIILGMKIAKDNSDYSEVTMRITPEKTTFVQISENCSDKVNVIVLSYTST 921 
WGS:AAPP:GF10195-PB 1013 YRSDWNRLATNRDLILRLRNPKDMHDASEVTARVTPESATFVEVSEVCTENVDVIKLSYQST 1074
XP_002068326        1069 FRSEWNRLATRRNIVLCLRNPKDPNEGAEVTCRVTPDNSTFVEVSELCSDDLDVFKLHYQPT 1130
XP_001983474        1047 FRSDWNRLSTRRNIVLCMRNPKDLNEGA-VTIRVTPNNSTFVEVSEPCSDNLETIKLAYQLT 1107
XP_002012193        1042 YRCDWNRLAPRRNILLCLRNPKDVNDGADVTIRVTPDNSTFVEVSEACTDDVDVIKLSYHLT 1103
WGS:AANI:GJ12586-PA 1088 YRCDWNRLATRRNIVLCLRNPKDLNDGADVTVRVTPDNSTFVEISEACSDNLDVIKLDYQPT 1149
WGS:AANI:GJ12585-PA  989 YRSSWNRLASRRNILMGMKNAKDNSDYTEVTMRITPDSVSFVEVSELCSDNLDVIRLDFKNT 1050
WGS:AAQB:GK13457-PA 1012 FRSNWNRLASRRNILLCMKNAKDNTEYSEVTVRITPDNATFVEVSELCSSDLNVFKLDYKPT 1073
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