1OCZ,1OCC


Conserved Protein Domain Family
Cyt_c_Oxidase_VIII

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cd00930: Cyt_c_Oxidase_VIII 
Click on image for an interactive view with Cn3D
Cytochrome oxidase c subunit VIII. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of prokaryotes. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. The number of subunits varies from three to five in bacteria and up to 13 in mammalian mitochondria. Subunits I, II, and III of mammalian CcO are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. Found only in eukaryotes, subunit VIII is the smallest of the nuclear-encoded subunits. It exists in muscle-specific and non-muscle-specific isoforms that are differently expressed in different species, suggesting species-specific regulation of energy metabolism.
Statistics
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PSSM-Id: 238470
Aligned: 10 rows
Threshold Bit Score: 59.2984
Created: 11-Apr-2003
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Subunit VIIIb/ISubunitSubunit
Conserved site includes 13 residues -Click on image for an interactive view with Cn3D
Feature 1:Subunit VIIIb/I interface [polypeptide binding site]
Evidence:
  • Structure:1OCZ_M: Subunit interface with 1OCZ_A (subunit I), defined using 3.5A contacts
    View structure with Cn3D
  • Citation:PMID 8638158

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #### ###  #    #      ##  #              #  
1OCZ_M         1 ITAKPAKT-PTSPKEQAIGLSVTFLSFLLPAGWVLYHLDNYKKS 43  cow
1OCC_M         1 ITAKPAKT-PTSPKEQAIGLSVTFLSFLLPAGWVLYHLDNYKKS 43  cattle
CAF89529     127 IYSKPPRN-KIGAAQSFFVMSVFTVVMLAPAAWILHHLPEYRQR 169 Tetraodon nigroviridis
P10176        26 IHSLPPEG-KLGIMELAVGLTSCFVTFLLPAGWILSHLETYRRP 68  human
Q7Z4L0        29 AHSGPPRQrPLSAAEMAVGLVVFFTTFLTPAAYVLGNLKQFRRN 72  human
XP_698270     25 ITAKPAKH-ALSAGEQVIALSVMFVTILGPSGWILSHLEDYKHR 67  zebrafish
XP_800527     26 IRSAPPKT-PLTLAEKFIGMGVISAGCLVIPGYIMSHLDVYKAR 68  purple urchin
XP_685495     28 LVTRPAKE-ALGPVETTAALAIFTLAILGPAGWVLSNLENYKKR 70  zebrafish
XP_941181     29 AHSEPPRQ-PMYAMEIWLLEFWCFTTFLTPSAYVLSSLSQFRKE 71  human
NP_001034138  29 SHSESPQKkILSPTESAVGIVVFFTTFYIPAAYVLSSLKYFKGE 72  house mouse

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