3F5N,3F5N,3F5N,3F5N,3F5N


Conserved Protein Domain Family
serpinI1_NSP

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cd02048: serpinI1_NSP 
serpin family I member 1, neuroserpin
Neuroserpin (NSP, also called proteinase inhibitor 12/PI-12) is an inhibitory member of the serpin family that reacts preferentially with tissue-type plasminogen activator (tPA). It is located in neurons in regions of the brain where tPA is also found, suggesting that neuroserpin is the selective inhibitor of tPA in the central nervous system (CNS). This subgroup corresponds to clade I of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.
Statistics
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PSSM-Id: 381005
Aligned: 13 rows
Threshold Bit Score: 701.191
Created: 9-Nov-2004
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
reactive center
Conserved site includes 28 residues -Click on image for an interactive view with Cn3D
Feature 1:reactive center loop (RCL)
Evidence:
  • Comment:depending on the conformational state, the RC loop is surface accessible in the active form or buried and inserted as the central beta strand in the inactive form.
  • Structure:3F5N: Human neuroserpin RCL in open conformation
    View structure with Cn3D
  • Comment:Human neuroserpin crystallizes as a pentamer in the asymmetric unit, but the biological unit is a monomer. Each RCL in the pentamer displays a different conformation, and is involved in pentamerization.
  • Comment:19265707

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
3F5N_B        20 EEAIADLSVNMYNRLRATGEdENILFSPLSIALAMGMMELgaqgSTQKEIRHSmgydslkngEEFSFLKEFSNMvtakES 99  human
3F5N_A        20 EEAIADLSVNMYNRLRATGEdENILFSPLSIALAMGMMELgaqgSTQKEIRHSmgydslkngEEFSFLKEFSNMvtakES 99  human
3F5N_C        20 EEAIADLSVNMYNRLRATGEdENILFSPLSIALAMGMMELgaqgSTQKEIRHSmgydslkngEEFSFLKEFSNMvtakES 99  human
3F5N_E        20 EEAIADLSVNMYNRLRATGEdENILFSPLSIALAMGMMELgaqgSTQKEIRHSmgydslkngEEFSFLKEFSNMvtakES 99  human
3F5N_D        20 EEAIADLSVNMYNRLRATGEdENILFSPLSIALAMGMMELgaqgSTQKEIRHSmgydslkngEEFSFLKEFSNMvtakES 99  human
Q9JLD2        23 DETIAEWSVNVYNHLRATGEdENILFSPLSIALAMGVMELgaqgSTLKEIRHSmgyeslksgEEFSFLRDFSSMvsaeEG 102 Norway rat
NP_001279664  24 DSTITEFSVNIYRYLSSLNKdRNIFYSPLSIATALGMVELgtngTTLEQIQHAmgyskmakgEEFLMLQNISQAmnepSQ 103 elephant shark
O35684        23 DETITEWSVNMYNHLRGTGEdENILFSPLSIALAMGMMELgaqgSTRKEIRHSmgyeglkggEEFSFLRDFSNMasaeEN 102 house mouse
Q90935        23 DETIAELSVNVYNQLRAAREdENILFCPLSIAIAMGMIELgahgTTLKEIRHSlgfdslkngEEFTFLKDLSDMatteES 102 chicken
NP_001086240  23 DAAVNEFSIKVYHELRATKEdENIIFSPLSTAIALGMVELgargSSLKEIRHVlgydklkngEEFSLLKDLSSMltaqEK 102 African clawed ...
XP_006002544  22 DSAVTEFSVKFYHYLRATGNdENILYSPLSVALALGVVELgahgSTLEELREAtgyslvrndEALTLTRDLMQSlkgeEK 101 coelacanth
NP_001122164  25 EDVTAEFSVRLYHQLQISSGeENIIFSPLSVALALGMVELgargSSLQEIRQAvgyshfredEEFSLLRNLSQAlstdEE 104 zebrafish
Q99574        23 EEAIADLSVNMYNRLRATGEdENILFSPLSIALAMGMMELgaqgSTQKEIRHSmgydslkngEEFSFLKEFSNMvtakES 102 human
Feature 1                                                                                        
3F5N_B       100 QYVMKIANSLFVQNGFHVNEEFLQMMKKyfNAAVNHVDFSQNVAVANYINKWVENNTNNLVKDLVSPRDFDAATYLALIN 179 human
3F5N_A       100 QYVMKIANSLFVQNGFHVNEEFLQMMKKyfNAAVNHVDFSQNVAVANYINKWVENNTNNLVKDLVSPRDFDAATYLALIN 179 human
3F5N_C       100 QYVMKIANSLFVQNGFHVNEEFLQMMKKyfNAAVNHVDFSQNVAVANYINKWVENNTNNLVKDLVSPRDFDAATYLALIN 179 human
3F5N_E       100 QYVMKIANSLFVQNGFHVNEEFLQMMKKyfNAAVNHVDFSQNVAVANYINKWVENNTNNLVKDLVSPRDFDAATYLALIN 179 human
3F5N_D       100 QYVMKIANSLFVQNGFHVNEEFLQMMKKyfNAAVNHVDFSQNVAVANYINKWVENNTNNLVKDLVSPRDFDAATYLALIN 179 human
Q9JLD2       103 QYVMKIANSLFVQNGFHINEEFLQMMKMyfNAEVNHVDFSENVAVANYINKWVENYTNSLLKDLVSPGDFDAVTHLALIN 182 Norway rat
NP_001279664 104 QYLLKLANSLFVQDGFQLSDKFLQMMKQyfNASVKNVDFNHPSDVAVYINQWVLDCTNHRIQKLVSPSDFTALSRLVLVN 183 elephant shark
O35684       103 QYVMKLANSLFVQNGFHVNEEFLQMLKMyfNAEVNHVDFSQNVAVANSINKWVENYTNSLLKDLVSPEDFDGVTNLALIN 182 house mouse
Q90935       103 HYVLNMANSLYVQNGFHVSEKFLQLVKKyfKAEVENIDFSQSAAVATHINKWVENHTNNMIKDFVSSRDFSALTHLVLIN 182 chicken
NP_001086240 103 HYVLSIANSLYLQNGFHISDKFIQLMKKyfKAEVENVDFSQGSAVASHINLWVENHTNNRIRDLFTADDFNNLTKLVLVN 182 African clawed ...
XP_006002544 102 HVTLKLANSLFLQNGFHVSDRFLQMMKKyfHATVENVDFSQSVSVANHINSWVENHTNNRIKNLVSSDDFSDLTRLVLLN 181 coelacanth
NP_001122164 105 QYVVRLANSLFLQSGVHFNEDFLQLMKKyfRAEVETVDFSQSTAVAERINSWVLNHTESKIQNLVSAEDFSSSTMIMLVN 184 zebrafish
Q99574       103 QYVMKIANSLFVQNGFHVNEEFLQMMKKyfNAAVNHVDFSQNVAVANYINKWVENNTNNLVKDLVSPRDFDAATYLALIN 182 human
Feature 1                                                                                        
3F5N_B       180 AVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQgEFYYGEFSDGSNEaggiYQVLEIPYEGDEISMMLVLSRQEv 259 human
3F5N_A       180 AVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQgEFYYGEFSDGSNEaggiYQVLEIPYEGDEISMMLVLSRQEv 259 human
3F5N_C       180 AVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQgEFYYGEFSDGSNEaggiYQVLEIPYEGDEISMMLVLSRQEv 259 human
3F5N_E       180 AVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQgEFYYGEFSDGSNEaggiYQVLEIPYEGDEISMMLVLSRQEv 259 human
3F5N_D       180 AVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQgEFYYGEFSDGSNEaggiYQVLEIPYEGDEISMMLVLSRQEv 259 human
Q9JLD2       183 AVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQgEFYYGEFSDGSNEaggiYQVLEIPYEGDEISMMLVLSRQEv 262 Norway rat
NP_001279664 184 AIYFKGSWKSQFRPELTQAFPFTKDDESEVQISMMYQQgEFYYGEFTDGTDEaggiYQVVELPYKGDEMSMMIVLPRQEv 263 elephant shark
O35684       183 AVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQgEFYYGEFSDGSNEaggiYQVLEIPYEGDEISMMLALSRQEv 262 house mouse
Q90935       183 AIYFKGNWKSQFRPENTRTFSFTKDDETEVQIPMMYQQgEFYYGEFSDGSNEaggiYQVLEIPYEGDEISMMIVLSRQEv 262 chicken
NP_001086240 183 ALYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQKgEFYYGEFTDGSNEaggvYQVLELPYEGEEISLIIILSRQEv 262 African clawed ...
XP_006002544 182 AVYFKGNWKSHFRPENTRTFPFTKDDESEVQVPMMYQEgEFYYGEFSDGSNEaggmYQVLEMPYEGDEMSMMIVLPRQEv 261 coelacanth
NP_001122164 185 AVYFRGSWKNQFRPENTRTFSFTRDDGSEVQTLMMYQQgDFYYGEFSDGTTEaggvYQVLEMLYEGEDMSMMIVLPRQEv 264 zebrafish
Q99574       183 AVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQgEFYYGEFSDGSNEaggiYQVLEIPYEGDEISMMLVLSRQEv 262 human
Feature 1                                                                                        
3F5N_B       260 pLATLEPLVKAQLVEEWANsvkkQKVEVYLPRFTVEQEIDLKDVLKALGITEIFIKDANLTG----LSDNKEIFLSKAIH 335 human
3F5N_A       260 pLATLEPLVKAQLVEEWANsvkkQKVEVYLPRFTVEQEIDLKDVLKALGITEIFIKDANLTG----LSDNKEIFLSKAIH 335 human
3F5N_C       260 pLATLEPLVKAQLVEEWANsvkkQKVEVYLPRFTVEQEIDLKDVLKALGITEIFIKDANLTG----LSDNKEIFLSKAIH 335 human
3F5N_E       260 pLATLEPLVKAQLVEEWANsvkkQKVEVYLPRFTVEQEIDLKDVLKALGITEIFIKDANLTG----LSDNKEIFLSKAIH 335 human
3F5N_D       260 pLATLEPLVKAQLVEEWANsvkkQKVEVYLPRFTVEQEIDLKDVLKALGITEIFIKDANLTG----LSDNKEIFLSKAIH 335 human
Q9JLD2       263 pLATLEPLLKPQLIEEWANsvkkQKVEVYLPRFTVEQEIDLKDILKALGVTEIFIKDANLTA----MSDKKELFLSKAVH 338 Norway rat
NP_001279664 264 qLASIEPLLKTQQINEWANsikkEKVEVFLPKFKVKQSIDLKEVLSSLGMSEMFDMNADLSA----MTERNDLYISKAVH 339 elephant shark
O35684       263 pLATLEPLLKAQLIEEWANsvkkQKVEVYLPRFTVEQEIDLKDILKALGVTEIFIKDANLTA----MSDKKELFLSKAVH 338 house mouse
Q90935       263 pLVTLEPLVKASLINEWANsvkkQKVEVYLPRFTVEQEIDLKDVLKGLGITEVFSRSADLTA----MSDNKELYLAKAFH 338 chicken
NP_001086240 263 pLATIEPLLKAPLIEEWANsvkkQKVEVYLPRFKVEEVVNLKDILMRLGITKIFSGEADLSA----ISDSKDLFVAKVVH 338 African clawed ...
XP_006002544 262 pLATLEPLVKAQLIEEWASalkkQKVEVYMPRFKVEEQLDLKAVLMGLGITEVFSKYADLSA----MTEKKELFFAKAVH 337 coelacanth
NP_001122164 265 pLASLEPIIKAPLLEEWANnvkrQKVEVYLPRFKVEQKIDLRESLQQLGIRSIFSKDADLSAmtaqMTDGQDLFIGKAVQ 344 zebrafish
Q99574       263 pLATLEPLVKAQLVEEWANsvkkQKVEVYLPRFTVEQEIDLKDVLKALGITEIFIKDANLTG----LSDNKEIFLSKAIH 338 human
Feature 1                 ############################                   
3F5N_B       336 KSFLEVNEEGSEAAAVSGMIAISRMAVLYPQVIVDHPFFFLIRNRRTgTILFMGRV 391 human
3F5N_A       336 KSFLEVNEEGSEAAAVSGMIAISRMAVLYPQVIVDHPFFFLIRNRRTgTILFMGRV 391 human
3F5N_C       336 KSFLEVNEEGSEAAAVSGMIAISRMAVLYPQVIVDHPFFFLIRNRRTgTILFMGRV 391 human
3F5N_E       336 KSFLEVNEEGSEAAAVSGMIAISRMAVLYPQVIVDHPFFFLIRNRRTgTILFMGRV 391 human
3F5N_D       336 KSFLEVNEEGSEAAAVSGMIAISRMAVLYPQVIVDHPFFFLIRNRRTgTILFMGRV 391 human
Q9JLD2       339 KSFIEVNEEGSEAAVASGMIAISRMAVLFPQVIVDHPFLFLIKNRKTgTILFMGRV 394 Norway rat
NP_001279664 340 VSYLEVNEEGSEAAGVSGMIISNRMGSLAPQVLADHPFFFLIRNRKTgTIYFMGRV 395 elephant shark
O35684       339 KSCIEVNEEGSEAAAASGMIAISRMAVLYPQVIVDHPFLYLIRNRKSgIILFMGRV 394 house mouse
Q90935       339 KAFLEVNEEGSEAAAASGMIAISRMAVLYPQVIVDHPFFFLVRNRRTgTVLFMGRV 394 chicken
NP_001086240 339 KSFLEVNEEGAEAAASSGMIANSRMAVLYPQVIVDHPFFFLIRNRKTgSVLFMGRV 394 African clawed frog
XP_006002544 338 KSFLQVNEEGSEAAAASGMIAVSRMAVLYPQVIADHPFFFLIRNRKTgTILFMGRV 393 coelacanth
NP_001122164 345 KAYLEVTEEGAEGAAGSGMIALTRTLVLYPQVMADHPFFFIIRNRKTgSILFMGRV 400 zebrafish
Q99574       339 KSFLEVNEEGSEAAAVSGMIAISRMAVLYPQVIVDHPFFFLIRNRRTgTILFMGRV 394 human

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