Conserved Protein Domain Family
7tmA_OR52W-like

?
cd15956: 7tmA_OR52W-like 
olfactory receptor subfamily 52W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
This group includes human olfactory receptor subfamily 52W and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.
Statistics
?
PSSM-Id: 320622
Aligned: 3 rows
Threshold Bit Score: 376.127
Created: 17-Dec-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                #  ##           ###### #
Q6IF63        30 TWLTLVFGPIYLLALLGNGALPAVVWIDSTLHqPMFLLLAILAATDLGLATSIAPGLLAVLWlgpRSVPyavCLVQMFFV 109 human
NP_001000188  27 VWISLPFCFMFVLSLTGNAVLLSLIWKEHRLHqPMFLFLAMLSFVDLVLSLSTLPKMLAIFWfgaTAISsyaCLSQMFLI 106 Norway rat
XP_007442089  27 RWLSIPFSSIYMVSLLGNGMILWVVSSETALHtPMFLFLSMLAATDLLLASSVALQLLRILWfdaGEIGfdvCLAQMFSV 106 Burmese python
Feature 1        #  #                                            # #####                         
Q6IF63       110 HALTaMESGVLLAMACDRAAAIGRPLhYPVLVtKACVGYAALALALKAVAIVVPFPLLvakFEHFQAkTIGHTYCAHMAV 189 human
NP_001000188 107 HAFSaMESGVLVAMALDRFVAICNPLhYATILtLEVVAKIGGLVALRGVGLTIFFPSLacrLSFCAShTIAYTYCEHMSV 186 Norway rat
XP_007442089 107 HFFSaMESGTLMAMALDRYLAICWPLrYSSILtSSRVAKAGLLLVLRGVAIVGPCPLLvrrLSFCGSrVIAHSYCDHMAV 186 Burmese python
Feature 1                  #  ### ### ##                                            #  ## ##  #  
Q6IF63       190 VELVVGNtqaTNLYGLALSLAISGMDILGITGSYGLIAHAVlqlptrEAHAKAFGTCSSHICVILAFYIPGLFSYLTHRF 269 human
NP_001000188 187 VKLACGAttvDSLYAFAVAIFLGVGDVAFIAYSYGQIVKTVmrfpspEARGKAGSTCTAHVCVILFFYGPGFLSVVMQRF 266 Norway rat
XP_007442089 187 VKLACASptvDSVYGLVLILLIGGSDMLSIGMSYALILRTIlrlpsqQAQLKAFSTCSAHICIILTFYIPGLVSLLMHRC 266 Burmese python
Feature 1              ## ###  #  ##                 
Q6IF63       270 GhhtvPKPVHILLSNIYLLLPPALNPLIYGARTKQI 305 human
NP_001000188 267 Gps-tASAAKVILANLYLLFPPALDPIVYGIKTKQI 301 Norway rat
XP_007442089 267 Rhs-vPPSAHVLLSNLYMLLPPVLNPIVYGVRTKSI 301 Burmese python

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap