Conserved Protein Domain Family
RTTN_N

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pfam14726: RTTN_N 
Rotatin, an armadillo repeat protein, centriole functioning
Rotatin and its homologs such as Ana3 in Drosophila are found to be essential for centriole function. A deficiency of rotatin in mice leads to randomized heart tube looping, defects in embryonic turning, and abnormal expression of HNF3beta, lefty, and nodal. Thus it is required for left-right and axial patterning. Ana3 - the Drosophila homolog - is present in centrioles and basal bodies, is required for the structural integrity of both centrioles and basal bodies and for centriole cohesion. Rotatin also localizes to centrioles and basal bodies and appears to be essential for cilia function. This family represents the N-terminal domain.
Statistics
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PSSM-Id: 464283
Aligned: 29 rows
Threshold Bit Score: 80.6954
Created: 25-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EDW01415              25 EIRMLAFEQIETSFIHCLIYEDAItIKPMLLLRQLIRWFGFTPLA-DPDRILALMLE-LMRSRYGKVIPEKMSLQRLeke 102 
XP_001747380          46 EDRVGALHSITFKLACGLLLVSDL-VHKESLLKALLEWFNFEDVA-EHSAVLNLILK-LAEHPASAALLVDLGAVDF--- 119 
XP_004989644          64 QTRLHAVEQLLLYFQHTDISLPTL-LETEDFLRELLQWFNYEHVS-HYSQALEILQY-VIALPEGARQVGEIG-LQF--- 136 
XP_003058603          27 DVRVRALQSLQFKLENELLSFDDV-AVHEPTLRAMLEMFNFADTGmREAETVAMFSRiIAERPIAVKTLRGLGAMRF--- 102 
XP_002507995          27 DIRERAIASLNFKLSNDLLTFKDV-GSHSGVLRALLDWFGHEDSVpGDERALAMLRRiVEEEPTAAARLQNLGAEAA--- 102 
XP_015019454          28 EIRMRALEQIETRFIRCLQHDEAInFKPVLLLKQLIRWFGHTPLA-APDRVLALMLE-LLRSDYCETVVNKIPCQRLeae 105 
EDV99577              25 EIRMRAFEHVETSLMRCLHHEEAInFKPVVLVKQLIRWFGFTPPT-APDRVLALLLE-LMRSDYGDVIIRKIPCRRFqte 102 
WGS:AAPP:GF12844-PA   25 EIRMRALEQVETRFIRCLSLGEPLqFKPVLLLKQLIRWFGYTPLL-AADRVLAMLLE-LLRSKYSDAVIRKIPQSRLete 102 
XP_002074590          25 EIRMRTLEQVERGFIRCIRLKETLnFKPQLLFKQLIRWFGYTPLI-AVDRVLTLLLE-LLRSEYGNVVVKKITYERLcie 102 
EDX06743              25 EIRMRALDQIETRFIRCLQLGEPIqFKPVLLLKQLIRWFGYTPPL-VPDRVLAMIME-LLRSEYAEAVIRKIPYERFkae 102 
EDW01415             103 LLKIRlqcfAIPANLMATRCMDLLGDL 129 
XP_001747380         120 MRDLH----DYDPNSLDNEVIEQISHA 142 
XP_004989644         137 LTDLR----THCQEHDDEAFHAHVEVL 159 
XP_003058603         103 FAELA----DNSGKHVRPEIDALMKTM 125 
XP_002507995         103 LLEVT----DGASRQLAAQIESLVEKI 125 
XP_015019454         106 LNKIR----KILKNVESKRVMELLDNI 128 
EDV99577             103 LGKIR----QILRGLSTERCLKLLDKI 125 
WGS:AAPP:GF12844-PA  103 LAKVR----RILGSEESKRVMDLMEDL 125 
XP_002074590         103 LEKVM----KILYSIGAKQGIDLMKEL 125 
EDX06743             103 LEKVR----RVLHKQESKRISELLDDI 125 
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