Conserved Protein Domain Family
7tmA_XCR1

?
cd15182: 7tmA_XCR1 
XC chemokine receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors
XCR1 is a chemokine receptor specific for XCL1 and XCL2 (previously called lymphotactin alpha/beta), which differ in only two amino acids. XCL1/2 is the only member of the C chemokine subfamily, which is unique as containing only two of the four cysteines that are found in other chemokine families. Human XCL1/2 has been shown to be secreted by activated CD8+ T cells and upon activation of the innate immune system. Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling.
Statistics
?
PSSM-Id: 341337
Aligned: 8 rows
Threshold Bit Score: 357.827
Created: 9-Dec-2008
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
  next features
Feature 1:putative chemokine binding site [polypeptide binding site]
Evidence:
  • Comment:based on structures of chemokine receptors with bound ligands (chemokines, peptides, or chemical antagonists/agonists)
  • Comment:Small-molecule chemical ligands tend to bind deeper within the receptor core, compared to a peptide ligand neurotensin, which binds towards the extracellular surface of its receptor.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1              #                                                #  #               #  ## 
P46094        32 LATTVLYCLVFLLSLVGNSLVLWVLVKYESLesLTNIFILNLCLSDLVFACLLPVWISPYhwgWVLGdflCKLLNMIFSI 111 human
NP_001107334  42 AAVPFFYYTVFTLSLLGNGLILFLLLKYEKIktVTNLFILNLVISDLLFTITLPFWAFYHsneWVFGngmCKVVSSVFFI 121 western clawed ...
NP_001039303  37 HFTTVLYTLAFLLSLLGNTLVLWILFKYENLtsLTNIFIMNLCISDLVFSCMLPFWAVDQtfgWIFGeflCKAVNAIFSI 116 chicken
AAI55847      51 AFLPMFYYIIFTVSILGNGVVLLVVYKFEKMntVTNIFLINLVASNIIFTLTLPFQAVYHsseWIFGeplCKLVTSAYYL 130 zebrafish
NP_001038492  45 AFLPAFYYINFLLSLLGNGLVLCIIYKFEKLstVTNIFLLNLVISDLIFASSLPFWAVYHkseWIFGknlCKFVGSCYSV 124 zebrafish
AAH96954      30 IIIPLFFSIVVVMSCIGNILVLIILALYESLkfLTNVFILNLALSDLLFTFGLPFWASYFihgWTFGeigCKAVKFLFYV 109 zebrafish
XP_006004162  42 ILSSTLYLLALLFSIVGNSLVLWILVKHENLklLTNIFILNLAASDLIFTFSLPFWASYHlaeWLFGeilCKTMTAIFLI 121 coelacanth
XP_007899019  59 TFMPAFYVLLLLFSLLGNGLVLCVLVKYEYLrsITNIFILNLAVSDLLSAFCLPFWTMHHltgWIFGdimCKVVCAMFYT 138 elephant shark
Feature 1                                                                               ######   
P46094       112 SLYSSIFFLTIMTIHRYLSVVSplstlrvptlRCRVLVTMAVWVASILSSILDTIFhkv--------lsSGCDYSELt-- 181 human
NP_001107334 122 GFFSCILFLTVMTMDRYLAVVHavsaartrklIYVYVASIAIWVISFVSTVPKFVLygtrk---hdsagILCEETGFsad 198 western clawed ...
NP_001039303 117 GYYSGVFFLTLMTILRYLSVVSplstlrsqtqYCGSLVCLLVWTCSILIVVPEMIHttvve---tleevSTCDYDDWk-- 191 chicken
AAI55847     131 GFYSSILFLTLMTFDRYLAVVHcvvanknrrsVYAASLSVAVWIISLLESLEYLIRftvee---sqmdgLLCEDSNEnq- 206 zebrafish
NP_001038492 125 GFNSSILFLTLMTFDRYLAVVHsiaaaqsrrmAYAFGSSAAVWVVSIVASIKDIVLydvmk----tedgLLCEMTGYnqt 200 zebrafish
AAH96954     110 GFYSSVLFLTLMTIQRYMAVVHplsd--wekcRCFSVAPIIIWMMSGTAALVGALQskvmk----dlnnTYCEYESIk-- 181 zebrafish
XP_006004162 122 GFYSGIIFITIMTVHRYFIIVKplstlksketRYGILVCVIIWGVSILASLPELLStevkpqnqgehvtYICDHKSDf-- 199 coelacanth
XP_007899019 139 GFYSGIMFLTLMTFDRYLAVVHavsalrsrkvRYAAITSVIVWGSSILATLPHAIFstl-------teeSTCDYIYPket 211 elephant shark
Feature 1             #  ##                                                      #      #  #     
P46094       182 -----WYLTSVYQHNLFFLLSLGIILFCYVEILRTlfrsrsKRRHRTVKLIFAIVVAYFLSWGPYNFTLFLQTLFRtqii 256 human
NP_001107334 199 kidtwRRLGYYQQLTMFFLFPLIVILYCYTLIVVKlfntkmHNKDKAVKLISVIVLAFFICWTPYNVVIFLRLSPGdp-- 276 western clawed ...
NP_001039303 192 -----WKKVDIYQRNILFLISFGIIIFCYINILIIllrtrsRRKHRTVKLILVIVVAFFLSWAPYNILSFLITFPPptc- 265 chicken
AAI55847     207 ----wRTFSFYKQFVLFFLFPLVVFVYCYSRITLTimrtrmIGKHRTVRLIFVIVLMFFLFWSPYNIILMITEHKDleh- 281 zebrafish
NP_001038492 201 fltkwELIGYYQQFFLFFMVPLIIVLYCYVRITIRimytrlMEKCRAVKLIFIIVFTFFICWTPYNVVILLKAIKTyfkv 280 zebrafish
AAH96954     182 -----IKSGIAYFQNAFFFAAFLIMGFCYCRMLQTitnartSKRHKTVRLIFSIALVFFIGWAPYNIAMFLRSLTDqnip 256 zebrafish
XP_006004162 200 -----WRDVATYQQNVFFLISLAVAVYCYFHILKAllksktQVKKRTVKLIFTIVIVFLLSWAPYNIVIFMKSLKVvtfa 274 coelacanth
XP_007899019 212 a-lpwKLLRYFLQNVLFFVIPFAIIVYCYLRIIQTlikcrtMQKYRTVKLIFIIVVVFFLCWAPYNVVIFLTALKDlrif 290 elephant shark
Feature 1               #   #  ##  #                         
P46094       257 r--sceaKQQLEYALLICRNLAFSHCCFNPVLYVFVGvKFRTHL 298 human
NP_001107334 277 ------cNDYLNNAFYICRNIAYFHCCINPFFYTFVGtKFRRHL 314 western clawed frog
NP_001039303 266 -----qyEKDTLLAFHISRKIAFSHCCLNPVLYVFAGvKFKSHL 304 chicken
AAI55847     282 ----edcNSVLPYAVYITNNIARLYFCINPVFYTFLGrKFQNHV 321 zebrafish
NP_001038492 281 ---qndcSNALDYALYVTRNFAYLYCCISPVFYTFLGkKFQSHF 321 zebrafish
AAH96954     257 plnicevSKGVDYAYYLCRMLAFSHCCLNPVFYVFVGvKFRNHL 300 zebrafish
XP_006004162 275 ---ncerIRHLNYAFYVCRKIAFSHCFLNPIFYAFVGvKFRRHL 315 coelacanth
XP_007899019 291 k--tcevINQIEYADFFTLNIAYFHCCLNPLFYAFIGaKFRGHL 332 elephant shark

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap