Conserved Protein Domain Family
RING-H2_RNF11

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cd16468: RING-H2_RNF11 
RING finger, H2 subclass, found in RING finger protein 11 (RNF11) and similar proteins
RNF11 is an E3 ubiquitin-protein ligase that acts both as an adaptor and a modulator of itch-mediated control of ubiquitination events underlying membrane traffic. It acts downstream of an enzymatic cascade for the ubiquitination of specific substrates. It is also a molecular adaptor of homologous to E6-associated protein C-terminus (HECT)-type ligases. RNF11 has been implicated in the regulation of several signaling pathways. It enhances transforming growth factor receptor (TGFR) signaling by both abrogating Smurf2-mediated receptor ubiquitination and by promoting the Smurf2-mediated degradation of AMSH (associated molecule with the SH3 domain of STAM), a de-ubiquitinating enzyme that enhances TGF-beta signaling and epidermal growth factor receptor (EGFR) endosomal recycling. It also acts directly on Smad4 to enhance Smad4 function, and plays a role in prolonged TGF-beta signaling. RNF11 also functions as a critical component of the A20 ubiquitin-editing protein complex that negatively regulates tumor necrosis factor (TNF)-mediated nuclear factor (NF)-kappaB activation. It interacts with Smad anchor for receptor activation (SARA) and the endosomal sorting complex required for transport (ESCRT)-0 complex, thus participating in the regulation of lysosomal degradation of EGFR. RNF11 acts as a novel GGA cargo actively participating in regulating the ubiquitination of the GGA protein family. RNF11 functions together with TAX1BP1 to target TANK-binding kinase 1 (TBK1)/IkappaB kinase IKKi, and further restricts antiviral signaling and type I interferon (IFN)-beta production. RNF11 contains an N-terminal PPPY motif that binds WW domain-containing proteins such as AIP4/itch, Nedd4 and Smurf1/2 (SMAD-specific E3 ubiquitin-protein ligase 1/2), and a C-terminal C3H2C3-type RING-H2 finger that functions as a scaffold for the coordinated transfer of ubiquitin to substrate proteins together with the E2 enzymes UbcH527 and Ubc13.
Statistics
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PSSM-Id: 438131
Aligned: 20 rows
Threshold Bit Score: 77.0172
Created: 2-May-2013
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Zn binding site
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C H H C C CClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on the structures of other RING-H2 fingers with bound zinc
  • Comment:C3H2C3-type RING-H2 finger consensus motif: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-H-X2-C-X(4-48)-C-X2-C, where X is any amino acid and the number of X residues varies in different fingers
  • Comment:A RING finger typically binds two zinc atoms, with its Cys and/or His side chains in a unique "cross-brace" arrangement.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #  #              # #  #  #             #  # 
Q9Y3C5        98 ECVICMMDFvyGDPIRFLPCMHIYHLDCIDDWLMRSF---TCPSCM 140 human
CBY21025     117 ECAICFEDFeeGVPIRYLPCMHFYHAKCVDDWLIRSF---TCPTCM 159 Oikopleura dioica
EFX88455     105 ECVICMVEFmvGDSVRYLPCMHTYHVECIDDWLMRSF---TCPSCM 147 common water flea
NP_726563     91 ECVICMAEFcvNEAVRYLPCMHIYHVNCIDDWLLRSL---TCPSCL 133 fruit fly
EEC12010      89 ECVICMGEFamGDAVRFLPCMHIYHTDCIDDWLMRSF---TCPSCM 131 black-legged tick
XP_013403340  88 ECVICMGEFsiGDKLRYLPCMHIYHKDCIDDWLMRSF---TCPSCM 130 Lingula anatina
XP_011404949  92 ECPICMNDFipGELIRLLPCMHYYHIRCIDEWLMRAI---TCPTCV 134 Amphimedon queenslandica
XP_002115455  43 ECAICMNEFvvGVPIRYLPCMHTYHVECIDSWLVRSF---HCPSCM 85  Trichoplax adhaerens
XP_004949005 228 TCVICMSEYkeGDLLKILPCSHTYHHLCIDTWFDTQSrkkTCPFCK 273 chicken
F4HZZ4       232 TCAICIDDYrvGEILRILPCKHKYHAVCIDSWLGRCRs--FCPVCK 275 thale cress

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