1IRU


Conserved Protein Domain Family
proteasome_alpha_type_3

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cd03751: proteasome_alpha_type_3 
Click on image for an interactive view with Cn3D
proteasome_alpha_type_3. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis. Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Statistics
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PSSM-Id: 239720
Aligned: 22 rows
Threshold Bit Score: 315.759
Created: 12-Jun-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active sitealpha subunit
Conserved site includes 5 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                   #               # #            #                  
1IRU_U      4 GTGYDLSAStFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYeegsnKRLFNVDRHVGMAVAGLLAD 83  cattle
EAA37916   25 GSGYDVSCGsYSPDGKIFQVDYALKAVEQHGLCVGIRTSGGVALAVQKNIHDILEid-saPCFYQIEDSIVIAVAGLQPD 103 Giardia lamblia AT...
CAE76392    5 GTGYDLANSiFSPDGRNFQVEYAMKAVENGSTSIGIRCKDGIVLAAEKVITSKLLkqganKRIATVDRHLGIVYSGMIPD 84  Neurospora crassa
CAA88436    5 GTGYDLAAStFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYtdnanPRMFNVNDNVGVAVAGNYPD 84  nematode
AAF89683    3 GSGHDQSTDiFSADGRVFQVEYACKAVDNGSTAVAACCKDGVVVAVEKILTSRMLeegsnNRIHAVDRQAGICVCGVLPD 82  Trypanosoma brucei
CAA18639    5 GTGYDLGLF-FSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLkprvnNRIGSVDRHIGIATTGFIPD 83  fission yeast
Q27563      5 GSGYDLYVStYSPDGKLFQVDYANKAVENSGTLVAIKAKDGVVLGVEKLVPSKMLcsgsnRRVHHIDTHVGVAIAGFLAD 84  Dictyostelium disc...
XP_760923   5 GTGYDLSAStYSPDGRIFQIEYAAKAAENAGTAIAIKTKTGVVVAVEKLVQSKLLvpgsnRRIFNVAPHIGIVSAGLIAD 84  Ustilago maydis 521
XP_626788   5 GSGYDSSVStFSPDGRVFQVEYANKAVDNSGTTIAMIYNSGIVFAVDKYVASKMMvagtnRRVFAIDNQIGCCVAGFVTD 84  Cryptosporidium pa...
AAW45216    5 GTGYDLSVStYSPDGRLFQVEYANKAVEAAGVAIGLRCKDGVLLGVERILHSKLLvkganRRIASLDEHIGMAGAGLLAD 84  Cryptococcus neofo...
Feature 1                                                                                     
1IRU_U     84 ARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLysAVRPFGCSFMLGSYSvn-------------------- 143 cattle
EAA37916  104 GMVLVSKAREVAESYRENYSRIVPTGVLANSISGYMQLYTHygEVRPFGCSLLIAGYDsiasade--------------- 168 Giardia lamblia AT...
CAE76392   85 GRHFVDRARDEARGWRDNYKTPISTKDLAGRMGGYMQAYTLyqSVRPFGITAIIGGYDseldtpvegevgsgpsvgaggk 164 Neurospora crassa
CAA88436   85 GFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHTLg-ISRPFGAGAFFMSWNkq-------------------- 143 nematode
AAF89683   83 GLAVVSRARGEAENSRDIFSTPILGSLLASRIGEFMHVYTThyAYRPFGCSVIIASYAdd-------------------- 142 Trypanosoma brucei
CAA18639   84 GQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCysSVRPFGVMSFVATYDse-------------------- 143 fission yeast
Q27563     85 ARQLITRARSEAKNYKSTYGQPIPIKVLSQRIASYNHMHTLygSVRPFGCSIAITGIDqy-------------------- 144 Dictyostelium disc...
XP_760923  85 GKHLATRARSEAVSHLDNYRFPAPVKTLADRVAYYVQAYTLysSVRPFGVSAIIAGLDds-------------------- 144 Ustilago maydis 521
XP_626788  85 SNKIVSIARSESLNYQKIYGNPIPIRVLAERIAMYMHNFTLygSVRPFGCSILLGGLDqd-------------------- 144 Cryptosporidium pa...
AAW45216   85 GKHLASRGRDEASNFRDTYNTPVTVQILSDRLSAYLQAYTSygSVRPFGLSALVGGVDkt-------------------- 144 Cryptococcus neofo...
Feature 1                                  #                                                  
1IRU_U    144 ------dgAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQmkem-----------------------tcrdIVKEVA 194 cattle
EAA37916  169 -pttlktkYSLYLLQPSGDITNCFATAAGRHTSQAKVELENHMgpaekdtndrfnhlkrvhnsgglltgmseseAILATA 247 Giardia lamblia AT...
CAE76392  165 vegkkhggPFLYMVEPSGLYWGYYGAATGKGRQAAKAELEKLDlssdges------------------sltleqAVKEAA 226 Neurospora crassa
CAA88436  144 ------tgGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEKLKieel-----------------------dvnqLVKEAA 194 nematode
AAF89683  143 -------gPQLYVADPSGAVAGYYGIALGKGKTVAKTELEKLDfatl-----------------------tcseAVEKLT 192 Trypanosoma brucei
CAA18639  144 -------gPHLYMVEPNGVYWGYNGAAAGKGRQVARNELEKLNfssl-----------------------kmkdAVKEAA 193 fission yeast
Q27563    145 -------gPQLFLVEPSGSCVGYFGASLGKGKQAAKNELEEIRfsem-----------------------tcreAIKEVS 194 Dictyostelium disc...
XP_760923 145 ------kgPQIYMIEPSGVFWGYNGCAVGKGRQSAKTEIEKLDldnl-----------------------tqkeAVEEAA 195 Ustilago maydis 521
XP_626788 145 ------rgVELYCIHPSGSCYKYCAMAVGKGRQFARTDLEKLMeknl-----------------------seedALYEAA 195 Cryptosporidium pa...
AAW45216  145 -------gPKLFCVEPSGVYYGYRACAVGKGKALAKTELEKVVnkevetg-----------------eaitvreGVMELA 200 Cryptococcus neofo...
Feature 1                           
1IRU_U    195 KIIYIVHDEVKDKAFELELSWV 216 cattle
EAA37916  248 KVIWACHDHINDPEFTLRFAFI 269 Giardia lamblia ATCC 50803
CAE76392  227 RIIYVAHDDNKDKEFELEMTWI 248 Neurospora crassa
CAA88436  195 RIIMVVRDENKDKNVQIEMGWV 216 nematode
AAF89683  193 NILHEVHDKSKDKIYEVEVAWV 214 Trypanosoma brucei
CAA18639  194 RILYATHDEENNKEHEIEMTWV 215 fission yeast
Q27563    195 RIIYSVHDEVKDKDFELELGWI 216 Dictyostelium discoideum
XP_760923 196 KIIFKVHDDAKDKEFELELSWC 217 Ustilago maydis 521
XP_626788 196 RVIIQSREEGASKNLELEMAFI 217 Cryptosporidium parvum Iowa II
AAW45216  201 RIIYLVHDENKDKDFELEMTWI 222 Cryptococcus neoformans var. neoformans JEC21

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