Conserved Protein Domain Family
SYF2

?
pfam08231: SYF2 
SYF2 splicing factor
Proteins in this family are involved in cell cycle progression and pre-mRNA splicing.
Statistics
?
PSSM-Id: 462400
Aligned: 91 rows
Threshold Bit Score: 76.0957
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
EKC99564      48 NGVDLERKKAWEWSIEQNE-QWEKkQAQKdGNEDGSFS-NYQDHAWRRYNKNLRTTKPDLIAYNKQKESAlGlapgtlvp 125
EFN54389      57 lgLDPSKAYRLDTAETAEA-QFKKkEKKP---APQGWEqFNQATLAAAYEKRTEKIKPDRSEYEEAKSTDpE-------- 124
XP_002985595 137 sGIDKSKMYMLDTQEAAEE-KYKKrDKNP---APFGWDvFNQKSLYNAYKKRAKTIPNTVEEYAKVRDNDpD-------- 204
XP_006363753 144 KGLDMSKAYMLDTQESAET-KYKKwEKEP---APAGWDvFNKKTLYNAYKKRTKNVDVDVDEYNRMKETVpE-------- 211
ERN00930      57 NGLDITKAYMLDTQEAAEV-KYKKwEKEP---APFGWDvFNQKTLYNAYKKRTENIKCDMEEYEKLKECDpE-------- 124
CAQ37985     453 tdDKEDAPAIYTTSAAQAK-GASKkINKK--------ElIEVDRDKRFFKKMKFNFSINRNLYDEKKKKMgK-------- 515
EDL42927     434 GDDGEDPPAIYTTSAAQAK-GASKkKNKK--------DlLEVDRDSRFFKKMKFNFSINRNLYEEKKKKLgE-------- 496
Q8IAN0       531 NNNNNRRDKLYNTSAFHVK-KIMHkKNKK------KDDtYELENDTNLYKKIKFNFSINRKIYDEKKKIHgS-------- 595 Plasmodium falc...
Q4UCL3       401 qLISPNTSYPYIISAGMVE-KLSKiEKTKeKNKTFGWNiFNQDALYRAHKKRLRETGFNPDLYEKQKNELgE-------- 471 Theileria annulata
EDO07045     356 SSVNYNRNPGLNKAAIAVEkQHERdLKKE-KGKSFGWNvFNQDALYRAHKKRLKETAFNREEYELQKAQMgD-------- 426
EKC99564     126 agatndslaaagssksglsgaeDLYRSS-----ETmsYG--DHKPSDDAVDRVMSKINKEwvlthgarcaissillfvlg 198
EFN54389     125 -----------------------FYRTA-----DSllYGsaGR-VSEAGIDRMVAELNER-------------------- 155
XP_002985595 205 -----------------------FYCNE-----TSlqYGktPA-VPEEFVDRMVQELEGR-------------------- 235
XP_006363753 212 -----------------------FYREA-----SSlqYGkaPK-LSDEKIERMVKELKDR-------------------- 242
ERN00930     125 -----------------------FYRNA-----TSlqYGkaPK-TSEENIDKMVNELKER-------------------- 155
CAQ37985     516 ----------------------SFYGQDllitdTS--------KCTERDKNNVISFCRKQ-------------------- 545
EDL42927     497 ----------------------SFYGGDllatdSS--------KCTESDKNKVISFCRKQ-------------------- 526
Q8IAN0       596 ----------------------NFYNINllnheNT--------KANEYDKNKVVEFCKKQ-------------------- 625 Plasmodium falc...
Q4UCL3       472 ----------------------EFYRPGiv-----------nfNPNEASKDVVVRNVEKQ-------------------- 498 Theileria annulata
EDO07045     427 ----------------------LFYQPCls-----------ttETTEAAKLAVVHNLEKQ-------------------- 453
EKC99564     199 egaiagavpkacealgfkltSSVTNRRRKKDSDD-ESGDVTYINKRNKVFNKKVARYFDKYTKDIRANLE 267
EFN54389     156 ----------------------QGKSFSRRRAFR-EDKDVDYINDRNAHFNKKIERAFGTHTAEIKANLE 202
XP_002985595 236 --------------------ISKRKDFSRRRKYH-EEKDIDSINERNEHFNRKIERAFGKYTVEIKNNLE 284
XP_006363753 243 --------------------DEKRQSFSRRRKFH-EEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLE 291
ERN00930     156 --------------------EEKRKAFSRRRRFH-EEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLE 204
CAQ37985     546 --------------------EMVRSKLSRKRKED-NGVFKNYINKRNKMYNKKLDRYFNQHTAEIRQNLE 594
EDL42927     527 --------------------QVVRSKLSRKRQHE-DGLFKNYINRRNKMYNRKLDRYFNQHTAEIRQNLE 575
Q8IAN0       626 --------------------EELRSKMSRKRKEK-EGIFKNYINQRNKIYNKKLDRYFNKHTLEIRNKLE 674 Plasmodium falciparum 3D7
Q4UCL3       499 --------------------YKKRDAFSRRRLYDdEAQDISYINERNRVFNKKLERSFGTYSNEIKQNLE 548 Theileria annulata
EDO07045     454 --------------------YKQREKFSRRRAFEdDAKDVSYINQRNRVFNQKLDRAFKDHSAEIKGNLE 503
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap