Conserved Protein Domain Family
DNA_repr_REX1B

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pfam14966: DNA_repr_REX1B 
DNA repair REX1-B
This family of proteins includes Chlamydomonas reinhardtii REX1-B (Required for Excision 1-B) which is involved in a light-independent DNA repair pathway.
Statistics
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PSSM-Id: 434355
Aligned: 33 rows
Threshold Bit Score: 77.6494
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_002606823   8 QLIREFYGLQEERIKVYRRFEEGFETYLN-TSPNYDfapYRQLVHDVTQEFQRISSDVIAIRDRLRDDynqveVVKLLEK 86 
Q10214         9 ETVNKILRAQETRAQLYKELEDALNANQEkKIGLEQ---MGIIVQLVTEGLNEVSSDIRNYQASLTKE-----LKLLVDS 80  Schizosaccharom...
EPB87264      17 KQLQKLLKAQDTRLELYREFDIAFKDYLSgKCPAEQ---YHSVCKIVTEGFQDVSQEIQDVEKNVNEsd--kvIGGMIRQ 91 
Q84QI2        13 ACLRTFLELQSARAKLYARFDLGHKAFMR-NKAEST---FRCLMSDLTAAFSDCSRQVIALEAALKDMgr-pdLAAILRS 87  Chlamydomonas r...
XP_002952830   9 SAIQEFLQVQTCRAQLYSRFQDGFKTFIR-TRHEGP---YKALLSELTLAFNDCSKKVIGLESALQEMgr-adLAATLRT 83 
EGG17939      36 DILSIFFNTQGQRAAIYTKWNQGFRVYLD-TQNEEE---YTKLCQTVSSLISKVSKELIMIEAALQPik--pkWSTIINE 109
EGC39755      22 DKLALFFNLQEQRATISNKFSEAFKTFSK-DQDLEE---YNKKCTSITLQLSSLGAEIIQIENSLSTsn--peWSKTISK 95 
Q556G2        27 DKLALFFNLQEQRVLISNQFTSNFKKFLK-DQNIEE---YNKGCQSITTQLSSIGEEIIQIQESLSTtn--peWSKIISE 100 Dictyostelium d...
XP_002905595  58 ELARTFHKLQEMRVQIYAEFRQGFLVHQKte-------lFPTFCSGITERFSAVSERINHVEKLLRDKkq-pvIADLIRK 129
CBN74958     181 ALVASFRRAQEERVALYRKFNGGLKEALR-IGDYSG---YPALCCEVTAGFSVLSKAINAIEATLGKDsetkaLAGIIRR 256
XP_002606823  87 IQDEEKKKLQLTAEFQVAR 105
Q10214        81 LQEKERSKLQATVKLEQLK 99  Schizosaccharomyces pombe 972h-
EPB87264      92 LQNVEKERLEKTAKLQILT 110
Q84QI2        88 VQECERDKLRLTLALQALR 106 Chlamydomonas reinhardtii
XP_002952830  84 VQESERDKLRLTLTLQALK 102
EGG17939     110 LRDYEKVKFILTSKYQILK 128
EGC39755      96 IRELEKSKFLLTVEDQVLK 114
Q556G2       101 VRENEKTKFILTAQNQVLK 119 Dictyostelium discoideum AX4
XP_002905595 130 IQLEEKEKLLLTSAVLIEK 148
CBN74958     257 VQEHEREKLTVTAAHHLES 275
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