Conserved Protein Domain Family
Coa1

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pfam08695: Coa1 
Cytochrome oxidase complex assembly protein 1
Coa1 is an inner mitochondrial membrane protein that associates with Shy1 and is required for cytochrome oxidase complex IV assembly. It contains a conserved hydrophobic segment (amino acids 74-92) with the potential to form a membrane-spanning helix. The N-terminus of Coa1 is rich in positively charged amino acids and could form an amphipathic alpha helix, characteriztic of a mitochondrial presequence. A cleavage site for the mitochondrial processing peptidase is predicted adjacent to the presequence. Upon in vitro import into mitochondria, Coa1 is processed to a mature form, indicating that it possesses a cleavable presequence. The eukaryotic cytochrome oxidase complex consists of 12-13 subunits, with three mitochondrial encoded subunits, Cox1-Cox3, forming the core enzyme. Translation of the Cox1 transcript requires the two promoters, Pet309 and Mss51, and the latter has an additional role in translational elongation. Coa1 is necessary for linking the activity of Mss51 to Cox1 insertion into the assembly complex.
Statistics
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PSSM-Id: 430157
Aligned: 36 rows
Threshold Bit Score: 84.987
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
KIS71844            5 VVTV-GMALGSWAVFSLYATNTEKLSSSILKSVISQVKASPLVVDLLDthEPIVLKPELwlankPHIQGSVNMM---QGR 80 
Q16I65             13 TATYiAIGGITAALLMKSKLEDRVRMQPYYRESLKLLRAHPGAIQLLG--E--PIKEMG-----F-DFGEESKKy-gEGK 81  yellow fev...
Q09C66             31 PVLM----CGCLGAFVAYFVTSTIKSTDAYQQAVALVTANPEVQEALG--T--PIDFGW-------PRGSVNTTn-gEGR 94  Stigmatell...
WP_011525566       30 LVISiVLFFVLAVVVFVVGIFVLVSNTEPEKLAFAKAANSPAVVERLG--Q--PIKKGM-----F-SSGSINTTg-pSGH 98  Candidatus...
Q7UH60             80 GCLIaVMVCGGVIATGVVGAFALIKSSEPYTESLARAQTNEELQSMIG--D--PVDASI-----F-VQGSIKLNn-dDGN 148 Pirellula sp.
jgi:RoseRS_1044    18 GVTF--IVVVGCVVGIFAGVISLFRNSDVAQEALARAQRDPQVEAALG--R--PLEIGW-----FLPTGSLRTDangGGE 86 
jgi:Cyan7425_3418  92 AISF-PLMVISIGASIFFLVMNFISSSAPYEMAVNQVKNNPLVFEQFG--K--PIAIGW-----I-TTGNIETSn-dRGL 159
XP_017207846       11 MTIFmTVVTGGGCATMYYLMQKNFAKSEYYRQALEQLNSNSTAMASLG---APPLKIHN-----IHLSDRHNRId--HSS 80 
Q3T081              8 QVFFaGVAASGSCAILYYLVQKTFSRASYYQLALEQLHSHPEALEALG--T--PLNVHY-----LRLTDKYNFVd--IAD 76  cattle
EDP43767           36 IAGG-ASLVALWYVLSAYFNNKERVGSSVLRMVSQRVRSAPEVYELLG--EPVRIKRSMfg--dPWIEGIINPL---KGK 107
KIS71844           81 ID-LAFKIHPRNnhtNTATVYFTSIRPHKHAPFHILRFLVIHNh-sAKS---VNLLD 132
Q16I65             82 IEdFTLPVKGTQ---QRGKLHFWAERKDDQ--WHITRAELELNkdaDRR---LVIRK 130 yellow fever mosquito
Q09C66             95 AS-ISVPLEGPK---ASGTMRVEALAEGET--WTLDLLQVEVPg--RPA---IDLLD 140 Stigmatella aurantiaca DW4/3-1
WP_011525566       99 AE-LKVPISGPK---GEGYIYLTANKSADR--WTFTQLEVAIDg-dEKR---IELVE 145 Candidatus Koribacter versatilis
Q7UH60            149 TD-LNYSVSGPN---GAATVHVTGTKLDGN--WDYSRMDATTEd--GTK---IDLLD 194 Pirellula sp.
jgi:RoseRS_1044    87 VD-LTLPISGPR---GSGTLIISGVRTRGV--WEYDRLIVTVDg-tGQR---IDLLR 133
jgi:Cyan7425_3418 160 AC-LQIPVSGSK---ASGVIYVDAVRQDGE--WKFRQLFVTNEq-tNQP---ILLFM 206
XP_017207846       81 AQ-LKIPVTGSK---TGGYLYTTSTRDSLTNRWHLQQVVLKLRk--GDT---VEIFN 128
Q3T081             77 AK-LKIPVSGPK---SEGHLYVSSSRDAPFKRWNLQEVFLELKd--GQQ---IPLFK 124 cattle
EDP43767          108 VD-MSFEVVGPR---GVGTVYFTSVRKHKTDPFELLRFLVVPH---GDTsraISLLS 157
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