5XJC


Conserved Protein Domain Family
Mago_nashi

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pfam02792: Mago_nashi 
Mago nashi protein
This family was originally identified in Drosophila and called mago nashi, it is a strict maternal effect, grandchildless-like, gene. The human homolog has been shown to interact with an RNA binding protein. An RNAi knockout of the C. elegans homolog causes masculinization of the germ line (Mog phenotype) hermaphrodites, suggesting it is involved in hermaphrodite germ-line sex determination. Mago nashi has been found to be part of the exon-exon junction complex that binds 20 nucleotides upstream of exon-exon junctions.
Statistics
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PSSM-Id: 460697
Aligned: 37 rows
Threshold Bit Score: 220.17
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5XJC_v         7 FYLRYYVGHKGKFGHEFLEFEFrPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDR-V 85 
EFC44599       1 -----YVGHKGKYGHEFLEITFhPDGLLEYKNNTDYKGEGEILKTVNLNNIVLEQLKTIILESRIMEESDRKWPLPDN-I 74 
XP_004347475  23 FHLRYYTGHKGKFGHEFLEFEFsSDGLLRYANNTHYRGETIIRKQVYVSRAVLQELKRILADSEITREDGNMWPKPERsG 102
XP_651644     13 FYLRYYNGNHNQYGKEYIKFEIfDNGELKYCNQSRYRNETEIIKKLHLTRVVMKEIQDIISQSHILIQTDAHWPNKIN-G 91 
Q586G7         6 HYVRYFAGHTGRYGNEFLEFDIrDDGTLKYGNNSRYRNENIIKKQARISPAVLEEIKRLIILSGILERDDECWPQPDR-N 84  Trypanosoma brucei
KDE04290      32 FYLRYYTGHSGQHGHEFLEFEFtHDGRLRYANNSNYRRESLIRKELWLSRSSMLELQRIISQSGIIKENDTAWPKKNV-V 110
EXX50733       7 FYVRYYTGHMGRYGHEFLEFEFrADGRCRYANNSNYRNDSLIRKEMYVSPLMMKELKRIIQESEIMKEDDQKWPKKNV-V 85 
EPB90279       7 FYVRYYSGHRGRYGHEFLEFEFrSDGLCRYANNSNYRNDSLIKKEMYVSAAVIDELKRIIEDSEVMKEDDSQWPTKNV-V 85 
XP_003381674   6 FYLRYYGGSRGKFGHEFIEFVIkPNGHFMYINNSHYKNDTVIKRKGYLSATAIQAFKDMIKDSNILTEDDSKWPEPDY-K 84 
XP_012049242  11 FYLRYYTGHQGAHGHEFLEFEY-SYGRIRYANNSNYRNDSLIRKEMFVSPAVVDELKRIVRESEITKEDDVAWPRKNV-V 88  Cryptococcus ne...
5XJC_v        86 GRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI 148
EFC44599      75 GKSELEIVLDKEHISFATTKIQTLSEVTKSHDPEGLKNFYYLTADLKDFALNLINMHHKLKPI 137
XP_004347475 103 GKQELDIEMDGVRKSFNVSVIGKLSDVDNSNDAEGLKIFFYLVQDLKAFVYSLISMHFKINPI 165
XP_651644     92 SRQELEIEMNDIHIFFVTSKFGTLNEIRQSEDPQGLLIFYNFINDLICLLTTLTKSHSNIHSY 154
Q586G7        85 GRQELEIHLGDTHISFVTNKITSLSEVESPDKPKGLDTFYYFVRDIKALVLALVSLHFKIKAW 147 Trypanosoma brucei
KDE04290     111 GKQELELKFGRVHASFETAKIGSLVDVQQSDDPEGLRVFYYLVQDLKIFVFSLITLHYKIKPT 173
EXX50733      86 GRQELEIRLGNEHISFETAKIGSLVDVQESDDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI 148
EPB90279      86 GSQEIEVRLGNEHISFETSKLSSLVEVQDSKDPDGLRAFYYLVQDLKAFVFSLISLHFKIKPI 148
XP_003381674  85 GKQELEICMDGQHVSFTCCKLFSVSDCENSRDPDGLRALYYLAQDLKCLVFAIMSVHFKIKPI 147
XP_012049242  89 GKQELEVRIDKEHISFETAKIGALAEVNDSSDPDGLRVFYYLIQDLKCFIFALIQMHFKIKPI 151 Cryptococcus neoformans var. gru...
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