Conserved Protein Domain Family
NPL4

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COG5100: NPL4 
Nuclear pore protein [Nuclear structure]
Statistics
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PSSM-Id: 227431
Aligned: 3 rows
Threshold Bit Score: 818.473
Created: 7-Oct-2002
Updated: 23-Jan-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
462739     1 MLIRFRSKNGTHRVSCQENDLFGTVIEKLVGNLDPN-ADVDTFTVCEKPG-QGIhAVSELADRTVMDLGLKHGDMLILNY 78  baker's yeast
19074499   1 MIFIVRGPEGQRRVEVDESKVLG---PQLLAFFEVG-----QISVFSAPDgKGE----LDKSQAPDALGLRNGQVLYVEY 68  Encephalitozoon cun...
19112675   1 MILRFRSKRGMARAEFQPTDTLAMLSAKILSDILKNdYSPENVSLCQNESdQGV-IFSNLNDQTLQDAGLTHGQMLYLRL 79  fission yeast
462739    79 ----SDKP-ANEKDGVNVEIGSVGIDSKGIRQHRYGpLRIKELAVDEELEKEDGLIPRQKSKLCKHGDRGMCEYCSPLPP 153 baker's yeast
19074499  69 ------------EKKRDVP-KPKQDCSKGIKREKDS-------------------------MMCQHDSNAMCSNCAPLDP 110 Encephalitozoon cun...
19112675  80 gtpnSDIAsSNNEPALTVTGAPKQVSTPDVSEKKPS-MPVIQDPIDDSLEKEDGLIRRSMTSLCRHGPKGMCDYCSPLEP 158 fission yeast
462739   154 WDKEYHEKNKIKHISFHSYLKKLNENANKKENGSSYISPLSEPDFRINKRCHNGHEPWPRGICSKCQPSAITLQQQEFRM 233 baker's yeast
19074499 111 WDEKYYKDNMIKYLSFGSYCEMMKSKKKELG-VESYSVG----------TCED-HG--PHAKCNRCQEKNIILAPQVFRM 176 Encephalitozoon cun...
19112675 159 YDESYRQENKIKHLSFHAYLRKINSNVNKYASSQSFIPPLEEPSFTVKEKCPSGHPPWPAGICTKCQPSTVMLNLQPFRV 238 fission yeast
462739   234 VDHVEFQKSEIINEFIQAWRYTGMQRFGYMYGSYSKYDNTPLGIKAVVEAIYEPPQHDEQDGLTMdvEQVKNEMLqIDRQ 313 baker's yeast
19074499 177 VDHVEFDGKHLVENFIRNWRESGRQRFGFLVGRYMDHEMIPLGTKAVVSGIWEPEQEDYPDGFVI-------TGS-MDAP 248 Encephalitozoon cun...
19112675 239 IDHIEFASPGIVDSFLNKWRQSGFQRIGYTYGHFEQYNNVPLGIKGVIEAIYEPPQVSEADGVTL--EEWADEAL-VEQV 315 fission yeast
462739   314 AQEMGLSRIGLIFTDLSDAGAGDGSVFCKRHKDSFFLSSLEVIMAARHQTRHPNVSKYS-EQGFFSSKFVTCVISGNLEG 392 baker's yeast
19074499 249 FSGTGLEIVGMIYTDILME---RGSVTSDKVAKGYFLSSLEIEFIAKMQLMHPHTVRDGgREMEFGSRLATIVVTAEKDG 325 Encephalitozoon cun...
19112675 316 ATACGLRRIGIIFTDLTDDGSNSGKVLCKRHSDSYFLSSLEVYNSANFQTKFKNPCKWS-RSGYFGSKFVTSVISGNLNG 394 fission yeast
462739   393 EIDISSYQVSTEAEALVTADMISGSTFPSMAYINDTTDERYVPEIFYMKSNEYGITVKENAKPAFPVDYLLVTLTHGFPn 472 baker's yeast
19074499 326 SIGLQEYQVSNQCMALVKGGYILPTEDPRRFLAT-----R---DIFYR---TKAEEAMVKADPYLPGEFFLVKLTHGCK- 393 Encephalitozoon cun...
19112675 395 EIEVMSYQVSNIGTALYQADLIQPSVDPDRMLVKKEDQTRYVPDVLYRYTDKYGKQVSENAKPAFPVSFLLVTLTDGFP- 473 fission yeast
462739   473 tdTETNSKFVSSTGFPWSNRQAMGQSQDYQELKKYLFNVASsgDFNLLHEKISNFHLLLYINSLQILSPD-------EWK 545 baker's yeast
19074499 394 ----PNPLFRSIDFIPKKFGDRKMAEYFGGDFSMERFSNFT--LLTRIQGVFSNWKDLLKCIVERDEDKFraissseDFK 467 Encephalitozoon cun...
19112675 474 --EKPDPLFSNNDTSIITTLESTDETGRLRQLAK-LFDHN-----AIANGSLSNFSVLLAIAKLSILG---------KVS 536 fission yeast
462739   546 LLIESAVKNE---WEESLLKLVSSAGWQTLVMILQESG 580 baker's yeast
19074499 468 SFVSSMERYRsagWECKMCTFINEKNSCTCEMCNSTRD 505 Encephalitozoon cuniculi
19112675 537 IIIYFFYMY----------------------------- 545 fission yeast
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