Conserved Protein Domain Family
3A

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pfam00803: 3A 
3A/RNA2 movement protein family
This family includes movement proteins from various viruses. The 3A protein is found in bromoviruses and Cucumoviruses. The genome of these viruses contain 3 RNA segments. The third segment (RNA 3) contains two proteins, the coat protein and the 3A protein. The function of the 3A protein is uncertain but has been shown to be involved in cell-to- cell movement of the virus. The family also includes movement proteins from Dianthoviruses.
Statistics
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PSSM-Id: 279181
Aligned: 8 rows
Threshold Bit Score: 212.713
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9YNE3   25 VQTVPRQAQGILELLSSP--AAREALQG-SDFARWRGVPVSPAGGY------------FELA-PLRSVNTFARGLRSvfg 88   Olive latent virus ...
Q00271   12 QQSSAATSDDLQKILFSP--EAIKKMATeCDLGRHHWMRADNAISV------------RPLV-PEVTHGRIASFFKS--- 73   Cucumber mosaic vir...
P03603   20 KQAGGTSDEKLIESLFSE--KAVKEIAAeCKLGCYNYLKSNEPRNY------------IDLV-PKSHVSAWLSWATS--- 81   Brome mosaic virus
Q9DUT1    9 sHQLNALDNSLQSYLGSQ--EFKEDMREqAGFGRWKRVKASAGEKP------------IVLV-PDNSYSALKALMKS--- 70   Pelargonium zonate ...
A1XIQ1   14 sdksAAVSEQLIAQITAAveAGNKNLLRkLGMGSYGILYGAQEKKA------------MELFdPEDVHNITSLWSSFkkt 81   Tomato torrado viru...
Q1KZ55   10 SHVGADDFLELENILSSE--YNEEGIFKtSKTVC---IRTDKRIGV------------GFLT-PNDMISRLVGFINRk-- 69   Citrus leprosis vir...
Q06360    4 QDVKGDSYESVYNKI----------LDMqSEPGGANDLRTNRQRSFnienryvekaltQPGV-VTKMQDAWTNWTKT--- 69   Soil-borne wheat mo...
P36292   36 PWSSSDEKLALTKAMDASkgKILLNIEGtSSFGTYESDSIIESEGYd----------lSARM-IVDTNHHISNWKNDlfv 104  Tomato spotted wilt...
Q9YNE3   89 gstSRREAYI--------PQHGFYRLNYVLVAVVPHVEHSDPGEVTVQLVENTNPT-----RAVDGQELTARLADG---S 152  Olive latent virus ...
Q00271   74 ---GYDVGEL--------CSKGYMSVPQVLCAVTRTVSTDAEGSLRIYLADLGDKEl----SPIDGQCVSLHNHDL---P 135  Cucumber mosaic vir...
P03603   82 ---KYDKGEL--------PSRGFMNVPRIVCFLVRTTDSAESGSITVSLCDSGKAAragvlEAIDNQEATIQLSAL---P 147  Brome mosaic virus
Q9DUT1   71 ---EYEKGLI--------PSKGYMHLKWCLVFIVAHVPKETMGEVCIELRDPGISTa----DPLPGCQVVCALSDL---P 132  Pelargonium zonate ...
A1XIQ1   82 ftsSRDHGNL------------FFHLYGVMFFMVPHV-HGGEGSVKISLCSSNDPTnp------vlQEKVLYFSGG---A 139  Tomato torrado viru...
Q1KZ55   70 ---AEDAGVR--------SVESFRQISDVVLIIVPQI--ALPAELSLKLVDSANi-----lEAVNDQEVTVNSTGG---P 128  Citrus leprosis vir...
Q06360   70 ---NKEEGTP-----------YNMSYSCVLLNVIPTVPMGYAGTVEVSLLDSGLSPl---eNVIPDQTQMMELGKG---P 129  Soil-borne wheat mo...
P36292  105 gngKQNANKVikicptwdSRKQYMMISRIVIWVCPTIPNPT-GKLVVALIDPNMPS---------GKQVILKGQGTitdP 174  Tomato spotted wilt...
Q9YNE3  153 FVFAAAPTYDIVLEQAPILVegesagvvqRMFGIRTSVSGSLT-TG-SVVSVYPIWSAEFPIQGATFNHVAPSIV--HID 228  Olive latent virus ...
Q00271  136 ALVSFQPTYDCPMETVGNRK---------RCFAVVIERHGYIGyTG-TTASVCSNWQARFSSKNNNYTHIAAGKT--LVL 203  Cucumber mosaic vir...
P03603  148 ALIALTPSYDCPMEVIGGDSgr------nRCFGIATQLSGVVGtTG-SVAVTHAYWQANFKAKPNNYKLHGPATI--MVM 218  Brome mosaic virus
Q9DUT1  133 RAVMLVPDYDMPLGKSKLRLgnq---emrRMFFLHTKVSGFTG-QG-VAISLFPVWDCDFRGTCNNYVKVPAVSV--GI- 204  Pelargonium zonate ...
A1XIQ1  140 QAVLMSPTITLPFVKRGPMFyy-----tmECLGTRAQIPC----------SVVAIWKQKIDIRSAIYSKQETMSW--AIE 202  Tomato torrado viru...
Q1KZ55  129 CVVVMNCAHSIPNEDRTHVNgse----vhRRLGIQYQVDCDNIsGRvTTFSITALWREAFSFRPSFYKVSDPLVVpiSV- 203  Citrus leprosis vir...
Q06360  130 HVMCFFMHYSIPLNDKG------------RAVKLAFKIDAEMAsKGmSVMNVYSYWTQR-QGHLSAYSEPQRSTIskLML 196  Soil-borne wheat mo...
P36292  175 ICFVFYLNWSIPKMNNTPENccqlhlmcsQEYK-----------KGvSFGSVMYSWTKEFGDSPRADKDKC------MVI 237  Tomato spotted wilt...
Q9YNE3  229 RFNRSVAFEIDVLRRRfs-----lMRPLHLARSRES 259  Olive latent virus 2 isolate Italy
Q00271  204 PFNRLAEQTKPSAVAR--------LLKSQLNNIESS 231  Cucumber mosaic virus (strain FNY)
P03603  219 PFDRLRQ-----------------LDKKSLKNYIRG 237  Brome mosaic virus
Q9DUT1  205 --DRTERTSLLNCVKQ-------------LKQYAEN 225  Pelargonium zonate spot virus isolate tomato
A1XIQ1  203 ALHRPQFFQDRQEAAQ--------YISSVYSNATSS 230  Tomato torrado virus ESP/PRIToTV0301
Q1KZ55  204 GFRKAVIAKSHADLQRs------iGRGLIVTHHSSE 233  Citrus leprosis virus C BRA/Cordeiropolis
Q06360  197 GYDKSLKMKTRNDVRRf------vGRSLSLHNQEQS 226  Soil-borne wheat mosaic virus strain Nebraska
P36292  238 PLNRAIRARSQAFIEAckliipkcNSEKQIKKQLKE 273  Tomato spotted wilt virus (strain Brazilian BR-01)
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