1CNP,1K8U,1K96


Conserved Protein Domain Family
S-100A6

?
cd05029: S-100A6 
Click on image for an interactive view with Cn3D
S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interaction with target proteins. Several such proteins have been identified: glyceraldehyde-3-phosphate dehydrogenase , annexins 2, 6 and 11 and Calcyclin-Binding Protein (CacyBP).
Statistics
?
PSSM-Id: 240155
Aligned: 6 rows
Threshold Bit Score: 140.746
Created: 30-Jan-2007
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
Ca2+ bindingdimerization
Conserved site includes 10 residues -Click on image for an interactive view with Cn3D
Feature 1:Ca2+ binding site [ion binding site]
Evidence:
  • Structure:1K96_A, human S100A6 bound with calcium ions, contacts at 3.5 A.
  • Comment:side chain of the second-to-last C-terminal calcium-binding glutamate coordinates a water molecule in both calcium binding sites

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                           #  # #  #    #                           # # # #    #        
1CNP_A         1 MASPLDQAIGLLIGIFHKYSGKEGDKHTLSKKELKELIQKELTIGSKLQDAEIVKLMDDLDRNKDQEVNFQEYITFLGAL 80  rabbit
1K8U_A         1 MAXPLDQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLXEDLDRNKDQEVNFQEYVTFLGAL 80  human
1K96_A         1 MACPLDQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL 80  human
Q2EN75         1 MACPLDQAIGLLVAIFHKYSGQEGDKNTLSKSELKELIQKELTIGAKLQDAEIAKLMDDLDRNKDQVVNFQEYVTFLGAL 80  pig
Q98953         1 MAAPLDQAIGLLVATFHKYSGKEGDKNSLSKGELKELIQKELTIGPKLKDAEIAGLMEDLDRNKDQEVNFQEYVTFLGAL 80  chicken
XP_001372287  44 MESTLNDALCSIILIFHKYSSREGDKNTLNKQELKELIENELGLGDKIEDSEIVELMNSLDQNKHEEVNFQEFISFLGTV 123 gray short-tail...
Feature 1                
1CNP_A        81 AMIYNEAL 88  rabbit
1K8U_A        81 ALIYNEAL 88  human
1K96_A        81 ALIYNEAL 88  human
Q2EN75        81 AMIYNDVL 88  pig
Q98953        81 AMIYNEAL 88  chicken
XP_001372287 124 ALICNELL 131 gray short-tailed opossum

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap